RNA id: TU257131


Basic Information

Item Value
RNA id TU257131
length 404
lncRNA type inter_gene
GC content 0.60
exon number 2
gene id G173468
representative True

Chromosome Information

Item Value
chromosome id NW_025047688.1
NCBI id JAEQBD010000033.1
chromosome length 2000000
location 1776301 ~ 1776839 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GGGTAAACACCGAAACATCCGTTTTTTCGTGAGAAGAGCCGACCGAGTGTGCTGGAGGAGGAAAGCGCGGCGTCTCGTCTCGCTCCGCTGTGGACGTGGGTCTGAGGATGTGATCTCGGGAAAGTCGAGCGGAGAGCGCTCAGGAATCCGCCGCTTCCCCCCTCCGTGACGTGACGTGGCCCGCGAGGAGCCGTGGAGCAGATCCAGATAAAGAGCGCGCGCGCGCTGGCACGCTCGCATCCACACGCTGCGCGAGCTTACAAGGGTCTGTACCGCGCGCTGGTTCGTCGCGTGCTCGTGAGGGTTCTGATTCGGGTCAAAGGTAGAAAAGTTGCAAGCTCAAACGCAGACAAGACGCCGAGATCGATGGCAGCGTGATTGGGCCTGCTGATTAACGAATAAAG

Function

GO: NA

KEGG:

id description
ko04391 Hippo signaling pathway - fly

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU257113 lncRNA upstream 28496 1739368 ~ 1747805 (+) True G173454
TU257127 lncRNA upstream 41546 1733523 ~ 1734755 (+) True G173465
TU257107 lncRNA upstream 84394 1669552 ~ 1691907 (+) True G173449
TU257098 lncRNA upstream 155880 1616688 ~ 1620421 (+) True si:ch211-214p13.7
TU257044 lncRNA upstream 223874 1542535 ~ 1552427 (+) True G173410
TU257146 lncRNA downstream 58991 1835830 ~ 1838337 (+) True G173477
XM_043229602.1 mRNA upstream 107355 1647479 ~ 1668946 (+) True nr1i2
XM_043229603.1 mRNA upstream 107355 1647480 ~ 1668946 (+) False nr1i2
XM_043229593.1 mRNA upstream 129703 1634177 ~ 1646598 (+) True cfap91
XM_043229638.1 mRNA upstream 155849 1616609 ~ 1620452 (+) False si:ch211-214p13.7
XM_043229626.1 mRNA downstream 9707 1786546 ~ 1789324 (+) True LOC122332307
XM_043229633.1 mRNA downstream 17031 1793870 ~ 1796906 (+) False LOC122332310
XM_043229632.1 mRNA downstream 17116 1793955 ~ 1816106 (+) True LOC122332310
XM_043229631.1 mRNA downstream 36132 1812971 ~ 1816106 (+) False LOC122332310
XM_043229634.1 mRNA downstream 36171 1813010 ~ 1816105 (+) False LOC122332310
TU257087 other upstream 177567 1591651 ~ 1598734 (+) False si:ch211-214p13.8
TU256869 other upstream 357391 1415699 ~ 1418910 (+) True G173289
TU256864 other upstream 383127 1374278 ~ 1393174 (+) True G173286
TU256845 other upstream 514844 1199337 ~ 1261457 (+) True G173276
TU257176 other downstream 137959 1914798 ~ 1917331 (+) True G173493
TU257196 other downstream 186372 1963211 ~ 1964710 (+) True G173505

Expression Profile