RNA id: TU49367


Basic Information

Item Value
RNA id TU49367
length 290
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G33501
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 6166415 ~ 6166704 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CGGGGAGCGCCGACGCCGTCTTTCATCGCCCGACAGAATAAGACGAGCGCTTCCCAATTTGTCCTCCTTTAAGCCGCACACGCATACACAGGCGCATACGTTATCGCCTCATGAGCTCAGGTAATTAGAGGATTCAGCTTTGACTGAAGGCCAGTTTCTTTAGTCTGCGTGTGGCTGATAGAGCAACATTTTGAAGTCTTTTGTTCCACGTGAACCGCGAAAAGTCTCTGTAATTCTGCTGCCGGTGTCAAAACCCGTCATTACCTCTTTGTAGTGGCGTGCGAGGGGTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU49366 lncRNA upstream 792 6165405 ~ 6165623 (+) True G33500
TU49363 lncRNA upstream 1092 6125330 ~ 6165323 (+) True G33499
TU49349 lncRNA upstream 86992 6079083 ~ 6079423 (+) True G33492
TU49303 lncRNA upstream 269049 5863332 ~ 5897366 (+) True G33471
TU49270 lncRNA upstream 285886 5859290 ~ 5880529 (+) False G33453
TU49368 lncRNA downstream 30 6166734 ~ 6167250 (+) True G33502
TU49369 lncRNA downstream 659 6167363 ~ 6167586 (+) True G33503
TU49371 lncRNA downstream 7146 6173850 ~ 6174177 (+) True G33505
TU49372 lncRNA downstream 7917 6174621 ~ 6176655 (+) True G33506
TU49545 lncRNA downstream 65593 6232297 ~ 6235641 (+) True G33619
XM_043239165.1 mRNA upstream 3930 6105795 ~ 6162485 (+) False arhgef28a
XM_043239280.1 mRNA downstream 81091 6247795 ~ 6255340 (+) True hexb
XM_043239281.1 mRNA downstream 81093 6247797 ~ 6255340 (+) False hexb
XM_043238155.1 mRNA downstream 355832 6522536 ~ 6591580 (+) True fibcd1b
XM_043238156.1 mRNA downstream 355836 6522540 ~ 6591580 (+) False fibcd1b
XM_043238523.1 mRNA downstream 472543 6639247 ~ 6648360 (+) True zgc:63972
TU49351 other upstream 77853 6087262 ~ 6088562 (+) True G33494
XR_006251052.1 other upstream 187831 5959835 ~ 5978584 (+) False tnpo1
TU49128 other upstream 516530 5604333 ~ 5649885 (+) False G33355
XR_006250986.1 other downstream 81091 6247795 ~ 6254646 (+) False hexb
TU49600 other downstream 306643 6473347 ~ 6474191 (+) True G33664
XR_006251060.1 other downstream 626661 6793365 ~ 6824304 (+) False si:dkey-34e4.1
XR_006251059.1 other downstream 626661 6793365 ~ 6824158 (+) True si:dkey-34e4.1
XR_006251123.1 other downstream 783195 6949899 ~ 6949965 (+) True LOC122346228

Expression Profile