RNA id: TU49371



Basic Information


Item Value
RNA id TU49371
length 328
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G33505
representative True

Chromosome Information


Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 6173850 ~ 6174177 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ATACATGTCTGCAAGTCTGCAGAGGGCCATATGGAAATATCAGCAgtttaaagaacaaaatgaGGGAGgactaaaaattaatttgacgTTTTTCAGCTTTAGAAAAGCGGTGGGTTATGAATAACTTCCTTTAGAGGACtaagaaaagggaaaaatgcGAACTGTCAACATGATAACGGGACACTTTGTTAACACTTGTCTggtgcatttgtctttttttttcattattattcctTCTCTTGTTGCTCATCTAGTTTAAACCAGTGATGCTGAGCAAGAAATTCTGAACCCTAGTGCCAACGCTCAGAGTCTAGTGCAAGTATTAATT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU49369 lncRNA upstream 6264 6167363 ~ 6167586 (+) True G33503
TU49368 lncRNA upstream 6600 6166734 ~ 6167250 (+) True G33502
TU49367 lncRNA upstream 7146 6166415 ~ 6166704 (+) True G33501
TU49366 lncRNA upstream 8227 6165405 ~ 6165623 (+) True G33500
TU49363 lncRNA upstream 8527 6125330 ~ 6165323 (+) True G33499
TU49372 lncRNA downstream 444 6174621 ~ 6176655 (+) True G33506
TU49545 lncRNA downstream 58120 6232297 ~ 6235641 (+) True G33619
TU49602 lncRNA downstream 299170 6473347 ~ 6491986 (+) False G33664
TU49603 lncRNA downstream 301524 6475701 ~ 6494530 (+) True G33665
TU49604 lncRNA downstream 317375 6491552 ~ 6494530 (+) False G33665
XM_043239165.1 mRNA upstream 11365 6105795 ~ 6162485 (+) False arhgef28a
XM_043239280.1 mRNA downstream 73618 6247795 ~ 6255340 (+) True hexb
XM_043239281.1 mRNA downstream 73620 6247797 ~ 6255340 (+) False hexb
XM_043238155.1 mRNA downstream 348359 6522536 ~ 6591580 (+) True fibcd1b
XM_043238156.1 mRNA downstream 348363 6522540 ~ 6591580 (+) False fibcd1b
XM_043238523.1 mRNA downstream 465070 6639247 ~ 6648360 (+) True zgc:63972
TU49351 other upstream 85288 6087262 ~ 6088562 (+) True G33494
XR_006251052.1 other upstream 195266 5959835 ~ 5978584 (+) False tnpo1
TU49128 other upstream 523965 5604333 ~ 5649885 (+) False G33355
XR_006250986.1 other downstream 73618 6247795 ~ 6254646 (+) False hexb
TU49600 other downstream 299170 6473347 ~ 6474191 (+) True G33664
XR_006251060.1 other downstream 619188 6793365 ~ 6824304 (+) False si:dkey-34e4.1
XR_006251059.1 other downstream 619188 6793365 ~ 6824158 (+) True si:dkey-34e4.1
XR_006251123.1 other downstream 775722 6949899 ~ 6949965 (+) True LOC122346228

Expression Profile