Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU59046 |
| length | 836 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 2 |
| gene id | G39893 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056703.1 |
| NCBI id | CM032072.1 |
| chromosome length | 32833783 |
| location | 27285182 ~ 27286194 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0042116 | macrophage activation | biological_process |
| GO:0002274 | myeloid leukocyte activation | biological_process |
| GO:0002376 | immune system process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU59040 | lncRNA | downstream | 17953 | 27265289 ~ 27267229 (-) | True | G39888 |
| TU59023 | lncRNA | downstream | 51020 | 27232658 ~ 27234162 (-) | True | G39872 |
| TU59020 | lncRNA | downstream | 59620 | 27224887 ~ 27225562 (-) | True | G39870 |
| TU59004 | lncRNA | downstream | 95960 | 27188850 ~ 27189222 (-) | True | G39857 |
| TU58817 | lncRNA | downstream | 142524 | 27140795 ~ 27142658 (-) | False | LOC122344808 |
| TU59120 | lncRNA | upstream | 252294 | 27538488 ~ 27538861 (-) | True | G39935 |
| TU59121 | lncRNA | upstream | 252746 | 27538940 ~ 27539327 (-) | True | G39936 |
| TU59154 | lncRNA | upstream | 364256 | 27650450 ~ 27650827 (-) | True | G39951 |
| TU59171 | lncRNA | upstream | 462266 | 27748460 ~ 27789829 (-) | True | G39964 |
| TU59253 | lncRNA | upstream | 609449 | 27895643 ~ 27895961 (-) | True | G40021 |
| XM_043238698.1 | mRNA | downstream | 4791 | 27277047 ~ 27280391 (-) | True | spaw |
| XM_043238359.1 | mRNA | downstream | 112288 | 27168265 ~ 27172894 (-) | True | LOC122344788 |
| XM_043239545.1 | mRNA | downstream | 177803 | 27099855 ~ 27107379 (-) | False | LOC122345426 |
| XM_043239544.1 | mRNA | downstream | 177805 | 27099855 ~ 27107377 (-) | False | LOC122345426 |
| XM_043239542.1 | mRNA | downstream | 185463 | 27095380 ~ 27099719 (-) | True | LOC122345424 |
| XM_043238696.1 | mRNA | upstream | 1978 | 27288172 ~ 27293486 (-) | True | usp39 |
| XM_043238697.1 | mRNA | upstream | 16065 | 27302259 ~ 27308208 (-) | True | mat2ab |
| XM_043239463.1 | mRNA | upstream | 26695 | 27312889 ~ 27334798 (-) | True | inpp5jb |
| XM_043238855.1 | mRNA | upstream | 57296 | 27343490 ~ 27389998 (-) | True | smtnb |
| XM_043238858.1 | mRNA | upstream | 57296 | 27343490 ~ 27389997 (-) | False | smtnb |
| unassigned_transcript_1081 | other | downstream | 1173780 | 26111332 ~ 26111402 (-) | True | trnag-gcc_64 |
| unassigned_transcript_1080 | other | downstream | 1175612 | 26109500 ~ 26109570 (-) | True | trnag-gcc_63 |
| unassigned_transcript_1079 | other | downstream | 1183773 | 26101339 ~ 26101409 (-) | True | trnag-gcc_62 |
| unassigned_transcript_1078 | other | downstream | 1193186 | 26091926 ~ 26091996 (-) | True | trnag-gcc_61 |
| unassigned_transcript_1077 | other | downstream | 1195394 | 26089718 ~ 26089788 (-) | True | trnag-gcc_60 |
| TU59072 | other | upstream | 96727 | 27382921 ~ 27398720 (-) | True | isca1 |
| TU59237 | other | upstream | 602929 | 27889123 ~ 27895454 (-) | True | LOC122344874 |
| TU59335 | other | upstream | 969634 | 28255828 ~ 28264704 (-) | True | G40080 |
| TU59455 | other | upstream | 2174391 | 29460585 ~ 29490204 (-) | True | G40182 |
| XR_006251000.1 | other | upstream | 2330805 | 29616999 ~ 29655061 (-) | False | eng |
