RNA id: XM_043238662.1


Basic Information

Item Value
RNA id XM_043238662.1
length 8343
RNA type mRNA
GC content 0.48
exon number 54
gene id acacb
representative False

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 5595095 ~ 5620700 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CCGCTGAGGGTCCACTCCGTTAAATGACACTGCTGTTGATGTCTGCTGGCCAGTTGTAAAGAGAACAGCACTGAGTACTATACGCACGCTTTTCATTACGAGAGAAGGTCTGGACGCTGACTGACTGCTTCCCTCAAAGTTGAACACTTTCAAAACTCGAGACATAAAAGGAGCCATCACCGCGTCCTACAAGAAgcctttaaatttgtatatatgCCGTCACTCTTAGCTCGTACTCTTGTAGCCCATCTGAATGCATCATCAAGGTCTAAAGGGTGAGAGATGCCATCACAAACACCCACCACAGACTGTTCAGGAGAGCAGTCTCCTCCAGTGGACCTGAAACCAGCAAGCACTACAACAGGAAATGAGGAAATTCCCCCACTAGCTACTAGCGATTCCACTGACCAATCAAAAAGCACAGAAGAAGCCGTTTCCAACAGTTTTCCTATGGAAGCCAGTGAGTCAGATAGGCCCAGATTTGGTTCCAGTGTTGAGGCTAAAAAGAGAATGAAGTTTATTCTGGGAGCTTCTGAGGATAATTCCTCTGATGATGAGCCTTTGGTTATGGGTCAGGCCGCCAAACTTCAGCCCGAAAGCACAGAGACACCTAACACGCTACCTAGCACGTCATCGGAGGTGGTGCCACCCCCGAACCCATTAACCTGTTTGAGgCCTAGCATGTCAGGCCCCCACCTGCTGAAAAAGGGTAAAGAACACAGGAAGATGGACATGCACAGAGATTTCACTGTCGCCTCCCCAGCTGAGTTTGTGACTCGCTTTGGAGGAAATCGCGTTATAGACAAGGTGCTGATTGCTAATAATGGAATCGCTGCAGTTAAATGCATGCGTTCAATTCGACGCTGGTCCTATGAAATGTTCCGTAACGAGAGGATCATTCGTTTTGTGGTCATGGTCACACCTGAAGACTTGAAAGCCAATGCAGAGTACATTAAAATGGCTGATCACTATGTGCCAGTCCCCGGTGGCTCGAATAACAACAACTATGCCAATGTTGAGATGATTGTGGATATAGCCAAAAGGATTCCAGTGCAGGCGGTTTGGGCTGGATGGGGTCATGCTTCTGAGAACCCCAAACTACCAGAGCTTCTTCATAAATCAGGGATATCCTTCCTAGGCCCTTCTAGTAAAGCCATGTGGGCATTAGGAGACAAGGTGGCATCTTCCATTGTTGCCCAGAGCGCAGAAATCCCCACGCTGCCCTGGAGTGGAACCGGTCTAAGGGTTGCTTGGTCAGAAGAAGAACAGAGACATGGCCGTGTGATCAGTGTTCCACCTGAACTTTATGTGCACGTTTGTGTAAAAGATGTGGACGAGGGTATAGCGAGTGCAGAAAAGATTGGCTACCCTGTGGTAATCAAAGCATCAGAGGGAGGTGGAGGGAAAGGCATCAGAAAAGTGGACAGTTCCGAAGACTTTCCCAGCTTTTTCAGACAGgTGCAGGCTGAGGTGCCAGGTTCTCCTATTTTCATCATGCAGCTAGCCGAACACGCGCGCCACCTGGAGGTGCAGATCCTGGCCGACCAGTATGGTAATGCTATCTCTCTGTTCGGCAGAGACTGTTCCATCCAGCGCCGCCATCAAAAGATCATAGAAGAAGCTCCTGCTACCATTGTCTCCACCACTACTTTTGAACAAATGGAGAGGTATGCAGTACGTCTGGCTAAAATGGTGGGCTATGTGAGTGCCGGTACAGTGGAGTATCTGTTCACTGAAGATGGAAGTTTCTACTTCCTGGAGCTGAATCCACGCCTTCAGGTGGAACACCCCTGCACTGAGATGATCGCTGACGTTAACCTTCCTGCTGCACAGCTGCAGATAGCGATGGGGATCCCTCTTTACAGAATTAAGGATATCCGTCTTCTGTTTGGTGAAGCTccatgggaaaacacacctatTAACTTTGAATCTCCAGAAAGCATCCCCTGTCCGCGAGGTCATGTCATAGCTGCACGCATCACCAGTGAGAATCCAGATGAAGGCTTTAAACCAAGCTCAGGCACAGTTCAGGAGCTGAACTTCCGCAGCAGTAAGAATGTGTGGGGTTATTTCAGTGTAGGAGCAGCCGGAGGCCTACACGAGTTTGCTGACTCTCAGTTTGGACATTGTTTCTCCTGGGGCGAGAACCGAGAAGAGGCCATCTCAAACATGGTGGTAGCCATGAAGGAGCTGTCAATCAGAGGAGATTTCAGGACCACAGTGGAGTATCTCATTAAGCTACTAGAGACAGAGAGTTTTAGGAACAATGACATCGATACTGGCTGGCTGGATCACCTCATTGCAGAGAAAGTGCAGGTGGAGAGGCCAGATACCATGTTAGGTGTGGTATGTGGTGCTCTACAAGTTGCTGATGCAAGTTTTAGAGAGAGCATGTCTGACTTCCTACATTCACTGGAGAGgggtCAGGTCTTGCCTGCTGCTAGTCTTGTCAACACAGTCAATGTTGATCTGATCTATGATGGAGTCAAATACTGTCTACAGGTGGCTCGCCAGTCACCCACCACGTATGTTATCATAATGAATGATTCAGATATAGAAGTTGATGTCCATAGACTCAGTGATGGTGGTCTACTTCTTTCCTACGGTGGCAGTAGCTACACGACCTACATGAAAGAGGAGATTGACAGCTACCGCATCACAGTGGGCAACAAAacgtgtgtgtttgagaaagaGCGAGACCCTACGGTGCTCAGGTCGCCCTCTGCTGGCAAGCTGTTGCAGTATGTGGTTGCTGATGGTTCTCATGTTCTGGCTACACAGCCTTATGCTGAAATTGAGGTCATGAAGATGGTGATGACCCTGCATGTCCAGCATTCAGGatgcatttgctttttaaaaagacCAGGGACAGTATTGGAGCCTGGGTGTGTAGTGGCCCGAATGGACCTGGATGACCCCAGCTGTATTCATCCGGTAAAGCCGAATACAGAGCCATTACCTTCCCAGGAACCTTTACCTGTTGTAGGGGAGAGGCTTCATCAAGTGTTCCACAGTGTTCTGGAGAACCTGGTGAAAATTATGGATGGATACTGTCTACCAGAACCATACTTCAGTCAAAAACTGAAAAAGTGGCTCGACACGCTGATGAAGACTCTTCGGGATCCATCTCTACCTCTTCTTGAACTGCAGGAGATTATGACCAGTGTGGCGGGGCGTATACCAGTTACTGTGGAAAAGGCCATTCGAAAGGTCATGGCACAGTACGCCAGTAACATTACCTCAGTGCTCTGTCAGTTCCCCAGCCAAAGGATAGCAAACATCCTTGACAGCCATGCTGCTACGCTTCAGAGGAAAGCTGACCGAGAGGTTTTCTTCATGAACACTCAAAGCATTGTGCAACTGGTGCAAAGGTACCGAAGTGGCATCAGAGGGTACATGAAATCAGTTGTTCTGGATCTTCTGAGACGGTACCTTCAGGTGGAGATGCAGTTTCAGCAGGCTCATTATGATAAATGTGTCATCAATCTAAGAGAGCAATACAAGCCTGACATGACTCCAGTACTGGAGTGCATCTTCTCCCATGCTCAGGTCCCCAAGAAGAACGTCCTAGTCACCATGCTTATAGACCAGCTCTGTGGCCGGGACCCGACTCTTGCCGATGAGCTCATGGTCATTCTAAATGAGCTCACACAACTTAGTAAAATGGAAAACTGTAAAGTAGCACTTCGGGCCCGACAGGTGTTGATTGCCTCTCATCTGCCTTCATATGAACTCAGACATAATCAAGTGGAATCCATCTTTTTATCAGCTATTGATATGTATGGGCATCAGTTCTGTCCCGAGAACCTCAAGAAACTCATCCTGTCTGAAACCTCCATCTTTGACGTCTTGCCCAGTTTCTTTTACCACAACAACCGGGTGGTTTGCATGGCTGCCTTAGAGGTATACGTACGAAGGGGATATATAGCGTATGAGCTAAACAGCCTTCAGCATCATCAGCTGCAGGATGGGACGTGTGCAGTGGATTTCCAGTTCATGTTACCGTCATCCCACCCTAACAGAGGGAGCAGTCCTACTTTGAACAGaTTGTCCGTTCCTGTGAATGATACAGGAGAGTTTCAAGCGATGCGTCGCCAGGGCAGTGAGCTCTTCCTGGAGGGGGCACTGTCACCTCCCTGTCAGAGGATGGGAGCCATGGTTGCCTTCCATAGTTTTGAACACTTCAAAAGGTGTTTTGATGAAGTGATCTGCCGCTTTGCGGATCCGCTCTGTGAGAGTTCTCTGTTCTCTGATGGCTGTTCCACCTTCTGTGATGGGGAGAGCTGTAAGAACATGAAGGAAAATCCCATACACATCATAAATGTGTCAATCAAACAAGCAGACACTGAAGATGACGACGCTTTAGTTCAAGCTTTCACTGCCTTTTCTAATTCTAAAAAAACTCTGCTCTATGAGTACGGAATCAGAAGAATCACATTTTTAGTCGCCCAAAAGCGGGAGTTCCCGAAGTTCTTCACATTCAGGGCCCGAGATGAATTCCATGAAGACAGAATCTACCGTAACCTGGAGCCTGCTCTGGCCTTCCAGCTTGAGCTGAATCGTATGCGTAACTTTGATCTGACAGCTGTTCCCTGTGCCCATCACCGAATGCAACTGTACCTGGGTGCTGCTCGCGTGGAAGAGGGGGCAGAGGTCACAGATTATCGCTTCTTTATCAGGGCTATTATTCGCCACTCTGACCTCATTACCAAGGAGGCCTCATTCGAGTACCTGCAGAACGAGGGAGAGAGGCTATTGCTGGAAGCGATGGATGAGCTTGAAGTGGCCTTCAGTAACCTATCCACTCGTACTGACTGCAATCACATCTTTCTCAATTTTGTGCCCACTGTTATTATGGATCCCTCAAAGATAGAGGAGTCCGTCCGCTCAATGGTGATGCGTTACGGTAGTCGTTTGTGGAAGTTGCGTGTTCTCCAGGCTGAGCTGAAGATCAACATCCGCCTCACCACCAATGGAGATGTCATTCCCATCCGCCTCTTCCTCACCAATGAGTCCGGCTACTATTTGGATATCAGCTTATACAAGGAGGTCACTGACCCATCCACTGGACAGATAATGTTCCAGTCGTTTGGAGACAAGCAAGGTCCACTTCACGGCATGCTTATCAACACACCGTATGTCACAAAAGATTTACTGCAGGCCAAACGCTTCCAGGCTCAGACCCTCGGCACCACGTATGTCTACGACTTCCCTGAAATGTTCAGACAGGCTTTGTTTAAGCTTTGGGGACCAGGAGACAGCTATCCTAAGGACGTTTTGATGTTTAATGAACTGGTCCTGGATTCTCAGGGGAGACTAGTGCAGATGAACAGACTACCAGGAGACAATGAGATTGGCATGGTGGCTTTCCGCATGAAAATGAAGACTCCAGAGTATCCAGAGGGCCGAGATATCATTGTTATCTGTAATGACATTACCTATATGATTGGCTCATTTGGGCCCCAGGAGGATGAGCTTTTTTTGCGGGCATCTGAGCTGGCCAGAGCAGAGGGGATTCCACGTATCTACATCGCAGCCAATAGTGGGGCTCGAATTGGCTTGGCTGAGGAGATCCGCCACATGTTTCAAGTGGCTTGGATCGACCCAGATGACCCTTATAAGGGTTTTAAGTACATATATTTGACACCTCAGGACTACACCCGCATCAGTGCCTCTAACTCTGTCCACTGTCACCATGTAGAGGAGGGAGGCGAGTCTAGGTACATCATCACAGACATCATAGGGAAGGAAGAGGGCCTTGGAGTGGAGAATCTTAGGGGTTCAGGCACCATAGCCGGAGAAACGTCTCGGGCTTATAAGGAAGTCATCACCATAAGCATGGTCACGTGCCGTGCTATAGGAATTGGTGCATATCTGGTACGTCTAGGACAAAGAGTAATTCAAGTGGAAAACTCCCACATCATCCTGACTGGAGCTGGGGCACTAAACAAGGTGCTGGGTCGTGAAGTCTACACCTCCAACAACCAGCTGGGAGGGGTTCAGATCATGCACAACAATGGAGTGACTCACAACATCGTGCCTGATGACTTTGAAGGGGTGCTAACTATACTGCAGTGGCTGTCCTACATGCCAAAGAGCAATCAAAGTCCCATCCCAATAATGCCTCCGACTGATCCCGTTGAGAGAGAAATCGATTTTGTTCCCACAAAAGCCCCCTATGACCCTCGCTGGCTGCTGTGTGGACGACCCCATCCCACCGTGAAGGGAGCATGGCAGAGTGGATTCTTTGACCAAGGTACATTTATGGAGGTGATGGCTACCTGGGCACAGACAGTGGTGGTGGGCAGAGCCAGGCTCGGCGGGATTCCTCTTGGTGTCATTGCCGTTGAGACCCGCACAGTTGAAGTTACCATTCCAGCAGATCCAGCCAACTTAGACTCGGAGGCCAAGATCTATCAGCAGGCTGGTCAAGTTTGGTTCCCAGATTCGGCGTATAAAACTGCTCAGGCTATTGAGGATTTCAACAGAGAGAAACTTCCACTTATGGTGTTTGCCAACTGGAGAGGCTTCTCTGGAGGCATGAAAGATATGTATGACCAGGTGCTAAAGTTTGGCTCTTACATCGTGGACGCCCTGCGTGAGTTCAGCCAGCCCGTACTGGTTTACATCCCTGCCCACGCTGAGCTGAGAGGAGGATCATGGGTTGTGATCGACCCCACCATAAACCTTCAGCACATGGAGCTCTACGCAGATCGAGAAAGCAGAGGAGGTGTTCTAGAGGCCGAGGGTACAGTAGAGATaaagttcagaaaaaaagaccTGCTAAAGGCCATACAAAGGATCGATGCTGTGTACTCCCGTCTGGCTGAGCAGCTAGGGAACCCGGAGTTAGCAAGCCAGGAGCGTAAGGACTTGGAGGCCAAACTGAAGTCTAGAGAGGAGTTCCTTCTTCCCATCTACCACCAGGTGGCGGTGCAGTTTGTGGACCTTCATGACACTCCAGGAAGGATGCAGGAAAAGGGCGTCATCACGGACATCCTGGACTGGAAGAACGCTAGATCGTTCTTTTACTGGCGTCTGAGGCGACTGCTGTTGGAGGAGGTGGTGAAGGGGGAGATCATGCAGGCCAACCAAGATCTGAGCAACGGCCACATACAGTCCATGTTACGACGCTGGTTTGTGGAGACAGAAGGGACCGTAAAAGCATATCTGTGGGACAATAACAAAGTGGTGGTAGAGTGGTTGGAAAACCATCTGTCACAGCAGGACGGGACACGTTCAGTCATCAGAGAGAACATTAAATGCTTAAAGAGGGACTACGCTCTCAAACACATCCGCAGCTTAGTCCAAGCCAATCCAGACGTGACCATGGACTGCATCATCCAGATGGCTCAGAACATCACTCCCTCACAGAGAGCCAAAGTCTGCCACCTGCTGGCCACCATGGACAACTCCACCACCAGCTGATCACATCCATGTCATTTCAATAAACCTACAGACGGGTGACATCCAGACGgtattattaaataacagcgctttaatgctttaatgagaaaagacagaaagcaCTGTTCTTTGGATCAAAACATTGGTCAGTAGCCTTAAACGCACAATTTTAAATGTCCGGCATTAGCACAGTCCACATGTTTATCGCAGACTCACAGTGACCACGACAACGTTTCTCAGAACATTTCGTTCTCAAGAGAGGGAAACCAGTGTACAGTGGAAATAACCGACTGATGAATGTACAATGAACGGACAAGACTGAATATTAAATGGTTTCAGGGAATCACCGATGCTTGGGGCACGCCTGAATGGGTTAGGTTCATGCTGTGTAGCACTTCCTCAGGAATATATGCAACGTTAATCAAGCAGAACAAACTGTTATCAGTACGATACGCTCACCGTGTGGAATTAGCATCAGGAGAATTATTGATAACTTTAATTTCTAGTAATATGCAGTAAGCATTGCAAAATACTTGCAGAGTTGTTAAAGTACATTCAGACGCCATGAAGTTCGTTATCTGTTCGTATTAGATGTACAAAAATCTGCTTGGTGTTAAATATATCACATAATAATGAACGTAGTTATACAGTGTTATTTATCAGTGTCAGGGCCACTGTATATTTGAATGGCTTGTTTAATGGCTTTAATTCTTCTGTTTGTGTGAATGCAGCCATACAGTGGAGCTACTGATGCTGTGCTGAACTCAGCTATTGATTCCGATTGATCAGATGCAATGCCTTGAATcgattttgtgtgtttttagaacATACAAGTCAGATTAATACTTAGAGCCAAAGTGCCTGACTTTTGTCGACTGTTTATAaggctgtttttaaaaagatttgtaattatgcattaaataatctGTGTTTTCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU49099 lncRNA upstream 55697 5526849 ~ 5539398 (+) False G33348
TU49093 lncRNA upstream 55766 5469072 ~ 5539329 (+) True G33348
XR_006251080.1 lncRNA upstream 127064 5456097 ~ 5468031 (+) True LOC122346031
TU48915 lncRNA upstream 192311 5401315 ~ 5402784 (+) True G33206
TU48972 lncRNA upstream 224574 5368434 ~ 5370521 (+) True G33257
TU49281 lncRNA downstream 196720 5817420 ~ 5870510 (+) True G33454
TU49269 lncRNA downstream 238590 5859290 ~ 5860897 (+) True G33453
TU49270 lncRNA downstream 238590 5859290 ~ 5880529 (+) False G33453
TU49303 lncRNA downstream 242632 5863332 ~ 5897366 (+) True G33471
TU49349 lncRNA downstream 458383 6079083 ~ 6079423 (+) True G33492
XM_043238668.1 mRNA upstream 1916 5572311 ~ 5593179 (+) True rusc2
XM_043238669.1 mRNA upstream 1916 5572315 ~ 5593179 (+) False rusc2
XM_043238670.1 mRNA upstream 1916 5572316 ~ 5593179 (+) False rusc2
XM_043240220.1 mRNA upstream 25007 5548837 ~ 5570088 (+) False atp8b5a
XM_043238671.1 mRNA downstream 4567 5625267 ~ 5648047 (+) True myo1ha
XM_043239841.1 mRNA downstream 32875 5653575 ~ 5666827 (+) False ube3b
XM_043239842.1 mRNA downstream 32955 5653655 ~ 5666827 (+) True ube3b
XM_043239843.1 mRNA downstream 33070 5653770 ~ 5666827 (+) False ube3b
XM_043240291.1 mRNA downstream 50585 5671285 ~ 5679031 (+) True mvk
TU48849 other upstream 972035 4622507 ~ 4623060 (+) True G33174
TU48610 other upstream 1450699 3605186 ~ 4144396 (+) False G33015
TU48613 other upstream 1450699 3605186 ~ 4144396 (+) True G33015
TU48185 other upstream 3326901 2265145 ~ 2268194 (+) True G32706
TU48087 other upstream 3576636 2010411 ~ 2018459 (+) False LOC122345711
XR_006250955.1 other downstream 4567 5625267 ~ 5647425 (+) False myo1ha
XR_006251052.1 other downstream 339135 5959835 ~ 5978584 (+) False tnpo1
TU49351 other downstream 466562 6087262 ~ 6088562 (+) True G33494
XR_006250986.1 other downstream 627095 6247795 ~ 6254646 (+) False hexb
TU49600 other downstream 852647 6473347 ~ 6474191 (+) True G33664

Expression Profile