RNA id: XM_043238671.1


Basic Information

Item Value
RNA id XM_043238671.1
length 3712
RNA type mRNA
GC content 0.46
exon number 34
gene id myo1ha
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 5625267 ~ 5648047 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCTATTCTGAGCAGAACCGGCAAAATCAGCTCGTCCAGATCCTATCTGCTGCAGACGGGGAACATCCACGGAGGTGAGCCAGGACAGGGACTGAAGATCACCAGGCAGCTCGTCCTTCAGCTGCGAAGGaCTAATGAGAGACCCTGAGTGACCTTTTGGACCGCTGTCTCCCAGACTGAACCAAGGATGACACAGGACCACAGCAGAGGAAGCCTAAAGCATTGTCTCAAGAAGATCTGCCTATGATGGGTCAGAGGGTTCATTAGGAAGCCTTAGAGAAGGTTTGGTGACCACATGTGAGAAGGAAGCATCCGAAAAGCAACAGTGGAATTTCGAGGTGTTTCGTGGCACATGTTGGGATGGTAGGATTTGCTTGGctctagctggatggtgaaagGACTATTTAGGACAGCGTTGGTTTGGATGTGAGCAGTTCCTATATTTACATCGGCAGCTGACCAAAGATGCAGAAAGGAAAGGTTAAACTGGGTCAGTTGGACTTGGAGGGAGCCCTGATTGCCAGGGACCGAGTTGGCATCCAGGACTTTGTTCTTCTTGATGCCCACAACAGTGAGACAGCCTTCTTAGACAATCTGAAGAAGCGTTTCACTGAGGATTTGATATATACTTACATAGGTACTCTGCTGATATCTGTAAACCCATACAAAGAATTGGACATCTACACCAAGAAACAAATGGACCTTTACATGGGAGTGAACTTCTTTGAGCTGCCCCCTCATATATATGCATTAGCAGATAATGTCTACCACACCATGCTATCAGAAGcaaacaacaactttattttgatatccGGGGAGAGTGGAGCAGGCAAAACTGAGGCCTCCAAGAAGATCTTGCAGTACTATGCGGTCAGCTGCCCTAGTTCATCCTTACTGGACACCGTGAGAGACCGCATGCTCATGTCCAACCCTGTACTAGAGGCTTTTGGAAATGCTAAAACgatgaaaaataataactcCAGTCGTTTTGGAAAGTACATGGACATCCAGTTTGATTGTCAGGGAGATGCTGTTGGTGGCCATATCCTCAGCTATCTGCTGGAAAAGTCTAGAGTGGTTCACCAAAACCACGGTGAGAGAAACTTTCATATTTTCTACCAGCTGGTGGAGGGAGGAGAGGAAGACTTACTAAGGCAGCTGGGCTTGGAGAAGGACACAAAAAATTATAGTTATTTAGTGCAGGGAGAATGTTCGAATGTGAGCTCCATCAATGACAAGAATGATtggaaaactgttaaaaatgcattatcgGTCATTGACTTTGATGCTAATGACATTGAGCACCTCTTTGGGATTATAGCTAGTGTTCTTCATCTGGGGAACGTGCACTTTGATGGAGACACTAAAGGTTATGCTGTTCTAAACTCTAATGCAGCGCTGCGCTGGGTATCCAAGcTGCTAGGGATCCATGTACAGGTCCTTAATGAAGCTCTGACATTCAGGAAGATTGAAGCCAAATCAGAAGagGTTTTGAGTCCATTTACTGTTGATCATGCTATCTATGCCAGAGATGCTCTGGCGAAAGCCATCTATGGCCGTGCCTTCACGTGGCTAGTCAACAGGATCAATGAATCTCTGGAGAATAAAGATTCTGAGAGGAAGACGGTCATTGGATTGTTAGACATCTATGGATTTGAGGTATTCTTTGTTAACAGTTTTGAGCAGTTTTGCATTAACTACTGCAATGAGAAGCTACAGCAGCTCTTCATTCAGCTGACGCTAAAGTCTGAACAGGAGGAATACGAGGCAGAAGGAATTGAGTGGGAGACGGTGCAGTTCTTCAACAATAAAATCATCTGTGATCTGGTGGAAGAGAAGCACAGAGGGATCATCTCTGTGTTGGATGAGGAGTGTATGAGGCCGGGTGATGCCACGGATCTTACTTTTCTCGAAAAGCTTGAAGAGAAAATGGGCAATCATCCCCACTTTGTAACGCATAAACTGGCTGATAAGAAAACCCGCAAGTCTCTGGAGAGAGGCGATTTTCGTCTTCTTCATTATGCAGGGGAGGTGACTTACTGCGTTGTGGGGTTCATTGACAAAAACAATGATCTGTTGTACAAGAACATCAAAGATGCGATGCGCCTGTCAAAGAACCCTATAATACAGGAGTGCTTTCCAGCCACTGAGGGAGACAGCCGGAGAAGACCTGAGACAGTGGCCACTCAGTTTAAGAACAGTCTTCTTCGGCTGACGGAGATTCTGACCGCTAAAGAAGCGTGGTACGTGCGCTGCCTCAAGTCCAATGACAATAAACAGTCAGGCAAGTTTGATGAAGTTCTGGTCAGGCACCAGGTGAAATATCTGGGCTTAATGGAGCACCTCAGGGTCAGACGGGCTGGATTTGCTTACCGGCGTAGATATGAGGTTTTTCTAAAGAGGTACAAAGCTCTTTGTCCTGCTACTTGGCCGCACTGGAGAGGTATACCTTCAGAAGGGGTGGAAAAACTGGTGCAACATCTAGGATATCAACCCGATGAGTATAAAATGGGAAAGACAAAGATTTTCATACGATATGCTAGGACGCTTTTTGCCACAGAAGATGCCTTTGAAATCTGCAAACATGAACTGGCTACAAGACTGCAAGCCAAATACAAAGGTTACAGAGCCAAAGGAGAGTTTAGAAAACAGAAGGAAGCTGctacaaAAATTGAGACGTGCTGGAGAGGAGCGCAGGCTcgcaaagagagagagcgaagaGCCTGGGCTGTCAAGATCATTAAACAGTTTATTAAGGGTTACATCACACGTCGAGAGGCAAAAACTACTGACAACTCTGAATACCTGGCCTTCGTTCGACAGAGCTACCTAAATAGACTGAAAGCCAACTTACCAAAGACTGTCCTGGATAAGACCACATGGTTGACACCTCCCCCAGTCATGACAGAGACCTCAGAGATTCTGCGACAGCTGAACACACGAATGATGGTGAGGAAGTACGTGCGGGGAATTACGCCTCAGAAAAAAGCGCAGCTTCAGCAAAAAGTAGTCACCAGTGCCATCTTTAAGGGGAAGAAGGACAGCTACCCTTCCAGCATTGCTGTTCCTTTCGTGGACACTAGGATCAATGAACAAGACATCAATATGAGGGTTCTTCCGATTATACGAAATGAACGTATCAAGTACAGCGTTCCTGTGGTGAAGTACGACAGAAATGGATTTAAACCCAGACCAAGGCAACTTATTCTCACTCAGGCTGCTGTATATTTGGTAGAAGAGGCTAAGATCAAGCAAAGAGTGGAGTATGTTTCTGTAAAAGGTGCTTCTGTCAGTAATCTGGCTGACTCTGTCATGATCCTCCACGTTGCTTTTAATGACCCAAAACAGAAGGGGGACTTAGTACTTCAGTGTGACCACCTGTTTGAAGCTTTGACCAAACTGGCTATGATTGCAAAAAAGCAGAATAACATCAAGGTTGTTCAGGGaagCATCAAGTTCGAGATCCAGGCAGGCAAAGAGGGAGGTGTGGATTTCAGCACTGGTCAAGAACCtatgatttttaaaggaaaaaacgGCCATCTGATGGTGGTGGCTCCACGGGTCAAGTCTCGATGATGTAAAGGATGACCGAGTCTGTGTATATTTCATGAGGGAAACCCTTATGGAAGAAGATATCATTCACCATCCCCCaactgtgacacacacacacacacacacacacacacacacacacacacacacacacacacaca

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016459 myosin complex cellular_component
GO:0005524 ATP binding molecular_function
GO:0003774 motor activity molecular_function

KEGG:

id description
K10356 MYO1; myosin I

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU49099 lncRNA upstream 85869 5526849 ~ 5539398 (+) False G33348
TU49093 lncRNA upstream 85938 5469072 ~ 5539329 (+) True G33348
XR_006251080.1 lncRNA upstream 157236 5456097 ~ 5468031 (+) True LOC122346031
TU48915 lncRNA upstream 222483 5401315 ~ 5402784 (+) True G33206
TU48972 lncRNA upstream 254746 5368434 ~ 5370521 (+) True G33257
TU49281 lncRNA downstream 169373 5817420 ~ 5870510 (+) True G33454
TU49269 lncRNA downstream 211243 5859290 ~ 5860897 (+) True G33453
TU49270 lncRNA downstream 211243 5859290 ~ 5880529 (+) False G33453
TU49303 lncRNA downstream 215285 5863332 ~ 5897366 (+) True G33471
TU49349 lncRNA downstream 431036 6079083 ~ 6079423 (+) True G33492
XM_043238660.1 mRNA upstream 4567 5595095 ~ 5620700 (+) True acacb
XM_043238661.1 mRNA upstream 4567 5595095 ~ 5620700 (+) False acacb
XM_043238662.1 mRNA upstream 4567 5595095 ~ 5620700 (+) False acacb
XM_043238664.1 mRNA upstream 4567 5595095 ~ 5620700 (+) False acacb
XM_043238667.1 mRNA upstream 4567 5597579 ~ 5620700 (+) False acacb
XM_043239841.1 mRNA downstream 5528 5653575 ~ 5666827 (+) False ube3b
XM_043239842.1 mRNA downstream 5608 5653655 ~ 5666827 (+) True ube3b
XM_043239843.1 mRNA downstream 5723 5653770 ~ 5666827 (+) False ube3b
XM_043240291.1 mRNA downstream 23238 5671285 ~ 5679031 (+) True mvk
XM_043239993.1 mRNA downstream 100071 5748118 ~ 5804954 (+) True fam222a
TU48849 other upstream 1002207 4622507 ~ 4623060 (+) True G33174
TU48610 other upstream 1480871 3605186 ~ 4144396 (+) False G33015
TU48613 other upstream 1480871 3605186 ~ 4144396 (+) True G33015
TU48185 other upstream 3357073 2265145 ~ 2268194 (+) True G32706
TU48087 other upstream 3606808 2010411 ~ 2018459 (+) False LOC122345711
XR_006251052.1 other downstream 311788 5959835 ~ 5978584 (+) False tnpo1
TU49351 other downstream 439215 6087262 ~ 6088562 (+) True G33494
XR_006250986.1 other downstream 599748 6247795 ~ 6254646 (+) False hexb
TU49600 other downstream 825300 6473347 ~ 6474191 (+) True G33664
XR_006251060.1 other downstream 1145318 6793365 ~ 6824304 (+) False si:dkey-34e4.1

Expression Profile