RNA id: XR_006250986.1


Basic Information

Item Value
RNA id XR_006250986.1
length 1709
RNA type transcript
GC content 0.52
exon number 13
gene id hexb
representative False

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 6247795 ~ 6255340 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCggagcacaacacacacacagacagacactctCTCCTCAGAAGTCAGCTGACCGCGCATCGATCCACACAGACATGTACAGACTGCTCAAATGTGCGCCGCTGTTTTTGGCGGTGGCCGTCTGCAGTGGCTGGCTCTTCGACGACTTTGGAGGAAAACCGAAGGAGCCGGATGAAATCTCTCTCTGGCCGCTACCGCAGAAATACCAGTCGTCCGGCGTCGCCTTTAAACTCAGCGCCGCCAGCTTCCAGATCGTCCACGCCGCGCAGTCCTCCGCCGGACCGAGCTGCAGCTTGCTCGAGAACGCGTTTCGCAGATATTTTGAATACGTGTTCGGTGACCTGAAGAAGCACGAGAAGAGCCGAAAGAAAGCGCGCGACTCCGATCTCGCGGAGCTTCAGGTGTGGATCACGTCAGCGGATCCGGAGTGCGACGGTTACCCGAGTCTGAACACCGACGAGTCATATGAGCTGTCGGTCGATGAGCCCTCTGCTGTGCTGAAAGCTGCTAATGTATGGGGAGCTTTGCGAGGACTGGAAACATTCAGCCAGCTGGTCTATGAGGATGACTATGGAGCCaacaacatcaatAAGACCGACATCTCCGATTTCCCGCGGTTTGCCCATCGAGGGATCCTCCTGGACTCGTCTCGACACTTCCTGCCACTCAAAGTCATTTTGGCCAATTTGGAAGCAATGGCGATGAACAAGTTTAATGTATTCCACTGGCACATTGTGGACGATCAGTCATTTCCTTATATGAGCCGGACCTTCCCTGACTTGAGTCAGAAGGGAGCCTATCACCCATTCACACACGTGTACACTCCGTCTGACGTGAAGATGGTCATCGAGTTCGCCCGCCTGAGGGGGATCCGAGTCATCCCCGAGTTCGACACCCCAGGACACACACAGTCATGGGGCAATGGCATAAAGGATCTGCTAACACCTTGTTATAGTGGCTCTAGTCCTTCGGGATCCTTTGGGCCGGTGAACCCCATCTTAAACTCCTCTTATGAATTCATGACACAGTTTTTTAAAGAGATCAGCACGGTCTTTCCTGATGCCTACATACACCTGGGGGGAGACGAGGTTGACTTCAGTTGCTGGAAGTCCAATCCTGATATTCAGAAGTTTATGATAGAGCAGGGCTTTGGAACAGACTACAGCAAACTGGAGTCTTTCTACATTCAAAGATTGCTTGATATCGTGGCTGCTACCAAGAAAGGTTACATGGTATGGCAGGAAGTGTTTGATAATGGGGTGAAGCTGAAGGATGACACTGTGGTAGAGGTGTGGATGGGGAACAAGATGGAGGAGGAACTACAGAATGTGACTGGGGCAGGATTTACAACCATTCTTTCTGCCCCTTGGTACCTGGACTACATTAGCTATGGACAGGACTGGCAACACTACTACAAAGTTGAGCCACTCAATTTCCCTGCTGAAAGCCGACACACAGATCCATGTGTGGAAAGAAAAGCCGCAGTACCCAGATGAGATGGCGGCGGTAACAGCGGCTGGTTTCAGTGCTCTGCTCTCCACACCCTGGTACCTCAACCGCATCAGCTACGGCCAAGACTGGGCGAACATTTACAAAGCCGACCCCCAAAATTTCAACGGCACAGATGCACAGAAGAAGCTGGTGATTGGTGGAGAGGCTTGTCTCTGGGGAGAGTATGTGGATGCGACCAACCTCACTCCTCGACTTTG

Function

GO:

id name namespace
GO:0005975 carbohydrate metabolic process biological_process
GO:0004563 beta-N-acetylhexosaminidase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU49545 lncRNA upstream 12154 6232297 ~ 6235641 (+) True G33619
TU49372 lncRNA upstream 71140 6174621 ~ 6176655 (+) True G33506
TU49371 lncRNA upstream 73618 6173850 ~ 6174177 (+) True G33505
TU49369 lncRNA upstream 80209 6167363 ~ 6167586 (+) True G33503
TU49368 lncRNA upstream 80545 6166734 ~ 6167250 (+) True G33502
TU49602 lncRNA downstream 218701 6473347 ~ 6491986 (+) False G33664
TU49603 lncRNA downstream 221055 6475701 ~ 6494530 (+) True G33665
TU49604 lncRNA downstream 236906 6491552 ~ 6494530 (+) False G33665
TU49605 lncRNA downstream 236906 6491552 ~ 6494530 (+) False G33665
TU49607 lncRNA downstream 236906 6491552 ~ 6494530 (+) False G33665
XM_043239165.1 mRNA upstream 85310 6105795 ~ 6162485 (+) False arhgef28a
XM_043239167.1 mRNA upstream 85310 6105795 ~ 6162485 (+) False arhgef28a
XM_043239170.1 mRNA upstream 85310 6105795 ~ 6162485 (+) False arhgef28a
XM_043239164.1 mRNA upstream 85310 6105796 ~ 6162485 (+) True arhgef28a
XM_043239171.1 mRNA upstream 85310 6105796 ~ 6162485 (+) False arhgef28a
XM_043238155.1 mRNA downstream 267890 6522536 ~ 6591580 (+) True fibcd1b
XM_043238156.1 mRNA downstream 267894 6522540 ~ 6591580 (+) False fibcd1b
XM_043238523.1 mRNA downstream 384601 6639247 ~ 6648360 (+) True zgc:63972
XM_043238316.1 mRNA downstream 397385 6652031 ~ 6762808 (+) True dab2ipb
XM_043238318.1 mRNA downstream 427193 6681839 ~ 6762808 (+) False dab2ipb
TU49351 other upstream 159233 6087262 ~ 6088562 (+) True G33494
XR_006251052.1 other upstream 269211 5959835 ~ 5978584 (+) False tnpo1
TU49128 other upstream 597910 5604333 ~ 5649885 (+) False G33355
TU49131 other upstream 597910 5604333 ~ 5649885 (+) True G33355
XR_006250955.1 other upstream 600370 5625267 ~ 5647425 (+) False myo1ha
TU49600 other downstream 218701 6473347 ~ 6474191 (+) True G33664
XR_006251060.1 other downstream 538719 6793365 ~ 6824304 (+) False si:dkey-34e4.1
XR_006251059.1 other downstream 538719 6793365 ~ 6824158 (+) True si:dkey-34e4.1
XR_006251123.1 other downstream 695253 6949899 ~ 6949965 (+) True LOC122346228
XR_006251115.1 other downstream 695565 6950211 ~ 6950281 (+) True LOC122346219

Expression Profile