RNA id: XM_043239792.1


Basic Information

Item Value
RNA id XM_043239792.1
length 2820
RNA type mRNA
GC content 0.50
exon number 8
gene id klhl13
representative False

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 13733522 ~ 13776553 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AACAAGAGAGGAGGGGCTTTGTGAGGTCCATGAGTAGAGTGGATTTGGGGGTTTAAGAAGGAAACAAGGGTAAATTCCAGAGGTTGTGgtgttctgGGGTTTTGTGCCTGGGCATGGACCACCCTGTGCATAGAGGAGACACCATGTCCATGGGACTACACGACAGGTACTGTGCAATATCACTGGTGGAAGATGATGATGCTCAGATGATGAAGGTGTCGCTGGGATGCAGTGAAATGGGGCTTTCCTCCCACTTGCAGGCCTCGAAAACAGGAAACACACGATTTTTTACCAGcaacacacacagctctgtgGTTTTACAGGGTTTTGACCAGTTGCGGATAGAGGGCCTGCTGTGTGATGTCACATTGGTGGCGGGAGATGGGGATGAGGCGTTTCCTGTTCACCGAGCCATGATGGCCTCCTCCAGTGACTACTTTAAAGCCATGTTTACAGGTGGAATGAAAGAGCAGGATTTGATGTGTATAAAGCTGCATGGCGTGAATCGAATAGGGCTAAAGAAGATTATAGACTTCATTTACACCGCCAAACTCTCTCTCAACATGGAGAACCTACAGGACACCCTAGAGGCTGCTAGCTTTCTCCAGATCCTGCCTGTCCTTGACTTCTGCAAAGTCTTTCTCATTTCTGGGGTGTCGCTGGATAACTGCGTGGAAGTGGGGCGCATCGCCAACACCTACAACCTCACTGAGGTGGACAAATACGTCAACAACTTTATCCTGAAGAATTTCCCCTCACTACTCGGCACCGGCGAGTTTGTCAAGCTTCCATTTGAACGCCTAGCGTTTGTGCTTTCCTCCAACAGTCTAAAACACTGCAGCGAGCTGGACCTGTTCAAATCTGCGTGCCGCTGGTTACGCTACGAAGAAGGCCGCATGGAATACGCTGCCAAGCTAATGCGCAATATTCGATTCCCCCTCATGAGTCCAACAGAACTCATAAACCACGTACAGACTGTCGATTTCATGCGTACGGACAATACCTGTGTTAATCTTTTATTAGAAGCCAGCAACTACCAGATGATGCCATACATGCAGCCGGTGATGCAGTCGGAGCGAACTGTGATCCGTTCGGACAATACCCATTTAGTGACACTTGGGGGTGTGCTACGGCAGCAGCTGGTTGTAAGTAAAGAGTTGCGACTTTTTGACGAGAAAGCACACGAATGGAAGGCACTGGCACCCATGGACGCCCCGCGCTACCAGCACGGGATCGCAGTGATCGGGAACTTTTTGTATGTGGTCGGGGGACAGAGTAACTATGACACGAAAGGTAAAACAGCTGTGGATACCGTTTTTCGATACGACCCGAGATATAACAAGTGGATTCAGGTGGCGTGTCTGAATGAGAAGAGGACCTTCTTTCATCTGAGCGCTCTCAAAGGACATCTATATGCTGTGGGCGGGAGAAACGCTGCAGGAGAGCTGGCAACTGTGGAGTGTTATAACCCCAGGACAAACGAATGGACATATGTGGCCAAAATGAACGAGCCGCATTATGGACACGCAGGCACTGTTTACGGAGGATACATGTACATTTCAGGTGGAATAACCCACGACACCTTCCAGAAGGAGCTCATGTGCTTCGACCCGGATGCTGATAAGTGGACTCAGAAGGCTCCGATGACGACGGTCCGTGGCCTGCACTGCATGTGCACAGTGGGCGACCGCCTCTACGTCATTGGTGGAAACCACTTCCGGGGCACAAGCGACTACGACGACGTCCTGAGCTGCGAGTACTACAGTCCCGCTTTGGACCTGTGGACGCCGATCGCCGCCATGCTCCGCGGACAGAGCGACGTAGGCGTGGCCGTGTTCGAGAACAAGATCTACGTGGTGGGCGGCTACTCGTGGAACAACCGCTGCATGGTGGAGATCGTCCAGAAATACGACCCCGAGAAGGACGAATGGCACAAAGTGTTCGATTTGCCCGAGTCCCTGGGTGGCATCAGAGCTTGCACCCTCACCGTGTTTCCGCCCGAGGACCTCTCGCTCGCCGGTTCGCCGAGCCGCGAGTCTCCTCTGTCGGCTCCTTGAGAATGGACGgagggagagtgagagagacaggaaTAAACTGGACGGATCGGTTGGCAGACATACACAGATGGATGAGTAGATGCAGAtgcagtctctctctttctccctctccctctctttgtCCCCACAGGAAAAAGACAATGTTTGCACTCCCCACCGATATACGTTTCAGTGGTGTCTGTGGTGAAACCCCGTCCCTTCCCTCAAACGATTCCACTTCTCTTCCTCATCCCTCTGCAAATGCTGAAAAGTCCCCCTCTcgatgagaaagaaaaatggaagCACTCCCAGGGTTAGGTGTAACTACGTGTTAACATTGCATTTGGGGGGGGTTTGTTTCGTCTCTTTGGCAGGAATAACCTAGACTTGAACAACAAGTGACTTTGCAATTCAACTTTTCTACCTGAGTCTCCAGAGTTTTGCTATGAAGACTATGAAGTTTCCCTGATCCCACCTATTCTGAGGTCGCCTACCCCCTCacttctcactctctctttctatcaTGCCTGCTCATTTTTCCTGTTTCTGTCCGCTCTCACCCCTgacccagtttttttttttaaccctcatTCTCTTGTCTCTCTCAGGGGGTTAGTTGACCTTTGACCACAGGATGAGGAAACGGTTTTAAACTCAGGGGTTGGCCTGCCCCCATCCCTCCCTGCCTAACTGATATTTCATTTCTCTACTCCTGCTGTTGTTATGAACCATTAACAGAATTGTGTTTTCTAAATTTAATAAACcagattttgagaaaaaaaaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU53340 lncRNA upstream 1067 13731969 ~ 13732456 (+) True G36198
TU53333 lncRNA upstream 11957 13720785 ~ 13721566 (+) True G36191
TU53304 lncRNA upstream 84985 13647926 ~ 13648538 (+) True G36168
TU53263 lncRNA upstream 152725 13566977 ~ 13580798 (+) True G36141
TU53255 lncRNA upstream 211915 13519973 ~ 13521608 (+) True G36140
TU53521 lncRNA downstream 197979 13974532 ~ 13974759 (+) True G36332
TU53654 lncRNA downstream 222547 13999100 ~ 14000337 (+) True G36405
TU53655 lncRNA downstream 223973 14000526 ~ 14003531 (+) True G36406
TU53657 lncRNA downstream 229218 14005771 ~ 14007402 (+) True G36408
TU53675 lncRNA downstream 270224 14046777 ~ 14047494 (+) True G36420
XM_043238580.1 mRNA upstream 14972 13705427 ~ 13718551 (+) True zgc:163098
XM_043238581.1 mRNA upstream 28999 13700264 ~ 13704524 (+) True si:dkey-17o15.2
XM_043239045.1 mRNA upstream 94670 13633826 ~ 13638853 (+) True tagln2
XM_043239044.1 mRNA upstream 107101 13623847 ~ 13626422 (+) True LOC122345172
XM_043239046.1 mRNA upstream 109994 13620810 ~ 13623529 (+) True tppp2
XM_043238159.1 mRNA downstream 15590 13792143 ~ 13796337 (+) True LOC122344637
XM_043238160.1 mRNA downstream 15596 13792149 ~ 13796337 (+) False LOC122344637
XM_043240524.1 mRNA downstream 23274 13799827 ~ 13804456 (+) True si:ch1073-224n8.1
XM_043240096.1 mRNA downstream 33160 13809713 ~ 13843783 (+) False ltbp3
XM_043240093.1 mRNA downstream 33162 13809715 ~ 13843783 (+) True ltbp3
XR_006251084.1 other upstream 926307 12803952 ~ 12807216 (+) False LOC122346073
TU52846 other upstream 1028282 12703371 ~ 12705241 (+) False iscu
TU52818 other upstream 1217415 12514076 ~ 12516108 (+) False si:ch211-225b11.4
TU52593 other upstream 1477851 12249138 ~ 12255672 (+) True G35720
TU53623 other downstream 207544 13984097 ~ 13985706 (+) True ins
TU53776 other downstream 513867 14290420 ~ 14292500 (+) True G36495
XR_006250972.1 other downstream 523490 14300043 ~ 14305304 (+) True LOC122345142
XR_006250973.1 other downstream 523490 14300043 ~ 14305304 (+) False LOC122345142
TU54000 other downstream 870936 14647489 ~ 14651911 (+) False fgf5

Expression Profile