RNA id: XM_043240724.1


Basic Information

Item Value
RNA id XM_043240724.1
length 2171
RNA type mRNA
GC content 0.48
exon number 1
gene id gas1b
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 7334377 ~ 7336547 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GGACCAATAGTGTGCTGCGCGCATACTTCTGGGGTCCGCGTAACTGAACGGATCCACCGAGACCTCtcgcggagagagagaggagccgGAGCGAGTTGAACTTTTTCCAGCTTTGTTATTTGGACAAGATGTAGCGCGAGGCCGCTCGTGGGACGCTTCGATGTAATTTATGATTCGTCGCTGGATCGCTGCACAAAGGACGGCGAGAATAAAGACTCAAGATGCTGCCGCGCGCTCCGCTCTCGCGGCAGTGAGCAAACGTGCTTCGTTTTCCAACCGTTTGGCGTGTCGTCCATGGAGGAGTTTCTGCGCACGTTCCTGCGGATATCGGAGGGACAAATATGAACGCGCTTAATTATCGAAGTGGCCAACAGAAGAACGCGGCTAGACGGCGGGCATGGAACAAGGGAGCTGTTTGCCTACGGTGGAGAAACATTATGGCTTATAAACCAACAGATGGAATCCCCCTCACAAGTTAACTTTTAAGCTTCTTCGACGTCAAGGAATGGCAAACTCCGGCAACTCTGCAGTCACTCTACGGCTGCAAATACTGATTCTGTCCATCGGCTGTGCGCTGATATGTTGTAGTCGTTTATCCATCGCATCGCCGGCACACAGCCAGCGTTTGATATGCTGGCAAGCCATCATAAAGTGCCAGGGAGAACCGGAGTGTCACTACGCGTACACGCAGTATCTACACGCGTGCGGTCCGGTGATAAACGGCAACAGGAAAAAGTGTCCCAGCCATTGCATTTCTTCCATCATCCAGCTCAATCTGACTGTGAACGGCCCGGCGCTGGAGGACTGCGAGTGCGCCTCGGACACTCTGTGCAAGATGACCAAGCGAGCCATTGAGCCCTGCATGCCCAGAACCAGCCACATGGGCTGCACCGAAGCGCGCAAGCAGTGCGAGAAGGACCCCGAGTGCAGCACCGCCATGCGGGACTATCTGCACCACTGCCGGAAACTGTTCGGCGGAGACCGCTGCTCGGACGACTGCCGGCGGGTCATCGCGAACATGCGCTCCATCCCCAAAGCCCAGCAGCTGGACACTTGCGTGTGCGACGGCACGGAGAGGACCATATGCGAGTATGTCAAAGGCAGCATGAAAAACTTCTGCTTTAACGACAGATTCGGCGGGAGCGGCTTTTCGGACACCGAGGACGACTTGGACGACGAGTACGAGTCGGATTATGAGGACGAGGAGAGCGATGCCTGGGATTTAAGAGCACAAAAGAGTTCGATCGCGATGTCCACCATTTTGACACTGTCATCTCTCTTTATAATAAGATAGGGCGTGTTTTAAAAACGAACTGCATGTTTGGTATGGGTGAAAATAACGGGGAGAACTCGGATTTCCCCAAATCAAGCCCCAACACCCCCTCCCCAGACATGgaagtaaaaacaaaaggtGCGCGCGCGCGTATATGTGTGCGCGGTGGGGGTTATATACAAAAACGTGTATATTAAGACACTTGGGAGTTCTCAAGGTTACTAAAAGCAACAGTAGCGCTACGGTAAAAGTAGCACATCACCTACCACTTTATTGTAGATTTAGCCAACACGCAAAAACACAAAgaccttttgtgtttttttttaatagaacgTCTTTAGCTGAAGTGCGAGACGAATCCTGTATCGTAAATtactgacagaaaaaaataatcccCTGAAAGAGTGAAGGAATGCTTCGCGCGTTGTTTTTGGTCACATTAGCAGCCGATTAAGTTTCATTGGCCAAAACACGTTAACATCGAACtttttgttgaattaaataGTTACATTTACTGCCAGGCGACTGAATCGGACGAAAAAGCATAACGGAAGAAAACCGGAATCCCATAGTGAAAagagtttttattaaaacctaGTTTGAGCTGCCGAAACCTGCACACAACGAAAAGGAGTAATTCGtctttatataaaagaaaatatgtgcTCCCCTATATATTAAGTTATTATGTTGTGGAAACTGCTTTTCAAAGAGATAGATAAATATTGgaagtttatttttgtatgaaagACTGGTTAGTGTACACAAAATGACTATTGTAAATGTGTATGATGTTTCTGTACCATATAATTGTGTGAATAATGTTGATAAACGATACCGTGTAATACAGTTTATAGCCTAATGTTCATAAAGATCGGCTTCGAATTATTCCAAAGAT

Function

GO: NA

KEGG:

id description
K06232 GAS1; growth arrest-specific 1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU49919 lncRNA upstream 599 7333469 ~ 7333778 (+) True G33888
TU49918 lncRNA upstream 4758 7329347 ~ 7329619 (+) True G33887
XR_006250915.1 lncRNA upstream 93667 7222397 ~ 7240710 (+) True LOC122344649
TU49887 lncRNA upstream 95231 7222418 ~ 7239146 (+) False LOC122344649
TU49878 lncRNA upstream 166235 7166608 ~ 7168142 (+) True G33857
TU49903 lncRNA downstream 6662 7343209 ~ 7344078 (+) False G33878
TU49945 lncRNA downstream 83593 7420140 ~ 7440356 (+) False G33891
TU49935 lncRNA downstream 85257 7421804 ~ 7443225 (+) True G33891
TU49936 lncRNA downstream 85257 7421804 ~ 7443225 (+) False G33891
TU49944 lncRNA downstream 85820 7422367 ~ 7443225 (+) False G33891
XM_043240174.1 mRNA upstream 8348 7320999 ~ 7326029 (+) True fbxw2
XM_043240525.1 mRNA upstream 15729 7304216 ~ 7318648 (+) True ncs1a
XM_043240209.1 mRNA upstream 33648 7286568 ~ 7300729 (+) True gpr107
XM_043240210.1 mRNA upstream 33648 7286590 ~ 7300729 (+) False gpr107
XM_043240212.1 mRNA upstream 33648 7288759 ~ 7300729 (+) False gpr107
XM_043239063.1 mRNA downstream 9443 7345990 ~ 7355235 (+) True dab2
XM_043239064.1 mRNA downstream 9443 7345990 ~ 7355235 (+) False dab2
XM_043239065.1 mRNA downstream 19147 7355694 ~ 7360060 (+) True hspb15
XM_043239058.1 mRNA downstream 23732 7360279 ~ 7370368 (+) True LOC122345181
XM_043239059.1 mRNA downstream 23732 7360279 ~ 7370368 (+) False LOC122345181
XR_006251030.1 other upstream 34566 7286590 ~ 7299811 (+) False gpr107
TU49701 other upstream 352384 6978548 ~ 6981993 (+) False kank1b
XR_006251122.1 other upstream 382648 6951658 ~ 6951729 (+) True LOC122346227
XR_006251121.1 other upstream 383011 6951290 ~ 6951366 (+) True LOC122346226
XR_006251114.1 other upstream 383619 6950686 ~ 6950758 (+) True LOC122346218
TU49900 other downstream 1921 7338468 ~ 7344078 (+) True G33878
TU49901 other downstream 1921 7338468 ~ 7344078 (+) False G33878
TU49954 other downstream 37359 7373906 ~ 7449497 (+) False LOC122345182
TU49933 other downstream 83593 7420140 ~ 7440775 (+) False G33891
TU49922 other downstream 89158 7425705 ~ 7446216 (+) False G33890

Expression Profile