RNA id: XM_043240905.1


Basic Information

Item Value
RNA id XM_043240905.1
length 3631
RNA type mRNA
GC content 0.49
exon number 15
gene id ankrd13a
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 5884921 ~ 5894400 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TTGCGTTTTCGGCGTCCCCTTCGCTAAATTCCACCTGTTTGATAGGCGGAGTagctgtgtatttattaacagTTAATTAGACGCATGAAGGGCTTTGATGGTTCATGACGGCGGCTAGCTCGCAGGCTGGCTCTTGATTTTGGAGGGGAGACACGGAGAGTTTGATCGAGGCAGAATGTTGTCCGCCACCGCTGCCAGCGTCGAGGATTTCAGCCTCAGGTTTCCGCTGCACGCGCTGGTGTGGGAGAACGACTACAGGAAGCTGGAAAAAGAGATCCAGACGAGTAACATCGAAGAGGTGGACCCCAGGGGCCGCACGCCCCTGCACCTGGCCGTCTCGCTCGGACACCTGGAGTCAGTGAGAGTGCTGCTCAGACACGGCGCAGATGTCTCCAAAGAGAACGACAAAAACTGGACCGTGCTGCAGGAAGCGGTCAGCACAGGAGATCCGGAGATGGTGCAGCTGGTGCTCCAGAGACGAGATTTCCTCAAAGCCTCCACTGCGCTGGGCGGCGTTCCAGAGTTACTGTGCAAGATCCGAGAGTCTTCTGATTTCTACATGGAGATGAAGTGGGAGTTCACGAGCTGGATTCCTCTGGTCTCGCGCGTGTGTCCCAGCGACGTGTGCAGAATCTGGAAGAGCGGGGCCTGTCTGAGGGTGGACACCACCCTGCTGGGCTTCGAAAACATGACCTGGATCAGAGGAAGAAGAAGCTATATCTTTAGAGGAGAAGACAACTGCACTGAGCTGATGGAGGTTAATCACGAGGACGAGGTGGTGGACACGGAGCGCTTCGATCTCTCCCGCGAGATGGAGGACGTCACGATGGACTCCATGCAGCCCGCCGAACAGGAAGTAGCCAAGAGGCTGACGACACCCATTGTCAACACATATCTGGACACAAAGAACATTGCGTTTGAAAGGTCTAAATCCGGTATCTGGGGTTGGAGGTCGGACAGGACAGAAGTGGTAAACGGATTTGAAGCCAAGGTTTTTTCAGTGAACAACGTGAACGTTGTGATTCGCACCAGGACGGAGCACCTCACAGACGAGGAGAAGGCCAGGATAAAAAGTGAGAGGAATGTTCTGGAGTCTTTACTCGGGACGGTAGAGCAACAGATCGGCGCTCAAGGGGACATGACTATGGAGTATGCAACTGCCACAAACCCCACAGCTATTACTCCAGAGGAGTACTTTAACCCCAACTTTGACCTGCAGGGCAGAGACATCGGTCGGCCCATTGAGCTCACCATCAGAACGCAGAAGTTTAAAGGCACCCTGTGGATGAGCGAAGAGCATCCTCTGTCTCTGGTGGAGCAGGTCACTCCCATCATTGACCTGATGGCTCGCACCAGCACTCACTTCGCCCGACTCAAAGACTTCATCAACCTCAGGTTTCCTCCTGGCTTCCCTGTGAAGATCGAAATCCCTCTGTTCCATGTGTTGAATGCCCGCATCACATTCGGAAACGTCAACAAGTGCAGCACAGACGAACCTTTGGACTCCAACCAATCGGCTTCTACACCCACACCTACAGAAGAGAAGTGCGACGGCCAGGCTTCAGGATCCGCTCCGTTCAAGGTGTGTCAGTCTGTGTTCGTGGCACCGGCGCACTATCACCATCGAGGGGGCTACCGGCACGCCAACGCACGCCATTACAACCCCGTCAGTCACGACGAGGAGCTGCTCCAGTACGCCATTCACCAGAGTCTGCTCGAGTCCAGTGCACTCAATTCACAGGACACTTGGAGTGATTCTGATGGACCGCCAACACAATCCATGATGAATCGCTTGAGCGATGGGTCTGGGTCTGAAGGAGTCTTGGTAGACCTTAGTGACACCACGCCCTCGAGCCCAGGCTCCACCTCCAGCCCCGACTCTGAGCTGCGATTGGCTATGGAGCTCTCCACCCGGGctcaggaggaggaggaaaagagaaggaaggaggaagaagaggaattACAGAGGATTTTACAACTCTCCTTAACAGAAAAGTGATCGAGTAAGACGAGGGAAGGAAGGAAAAAGGGAGTTCCTGTTATTGCCATAACcattaaacctttttatttataccTTTCTTCAGATTCACGCACTTCTCTGTTGCCACTGACATATTCACATGTATTCGGTTTGCAGCCAACGTCCCGAAGTTTCTACCGCTTTCGTGATCATCCATAGAGCATTTTCCcactttcttttcctctttcagaTGAGCGATCATGCATGTATTTTACAGGACATCCAGTGCTTTTGAGAGTTTGCACGTCCCGATCGAGTTTCATCGCTGGTTTTGACGGAAAGGAAGGTTGTTTCGCATCAACGTTAGCTTTAGGTTTATATCAATACTATATCTCAGGGTCAAACTGATATCCACCAGTCGTCGGTTCCTTTAAAGCCATTTTATACGCAGCCAAGGAAAGCGAAGGAAACGAATGTTTTACGCACGGCGGTACCATTTTCAGCCCGCTCCGACTGAAGCATCTCTACCGTAAAGGCAATAAACCACACCGCCGTGCCTCGCCGGAGTAAGAGGCACTCACGCAGACCGGGATATTTCCGAAAGGGCCTGTCCGATGTAAGCCGATACGCCTCAAGCTTTTAGTCGGCCTGATTTGTAAAACGATACAATAAAACCGTTTCGATGGCCGCGGGCATGTAGTGACGCGAGGGATGAATGCGGCAGCACTGGGTCGCTTTGCCGGCACCGACCAAACCTCATGCTTCTCTAGAGGAACGTGCGATGGGAAAACCAGTCCGTGGGAATGTGTGCGGTTGGACGGCATTGTTTGCCGAACGAGGTTCAGGTGTGGTAAAAGCGGAGGAACCGGCCCTGCTCTGTTCGGGGGAATCTCGTGCCGTTCCTTCCTGTTGTAGCTGACAGTGCTATTTATTCcgcaaatgtcttttttttttcattgatatCTTTAATGTACTTCTGTCGACGTGTTTTTAAAGCTCTGCGAGGCTCAAAAGACGTCTCGAGCATTGGCTTACGGCTTGCAGTATCTCACTCACGACTTTTTGTATGAAGCTCGAACCCATTTTAACCGTATCTTCTGTCACCTCATCGTATGTGATTTAATAGacattttatattgctttaGTCTTTCTGTAGCGAACCAGGATCTGAGGATAGTGCCACGGTCTCACGTTTATAATAGGgatgttttatattaacattgaTTCTAGTTTCCTGTATTTATTCTTATGCTGCGTTTAAATAAGAGAGCAGAATAAATCGGATGTTCTGGCTGCGGTTTTCCACGTGTCGTGATTCCTGGACACAAAATTCCActtcatctttttatttaaaaacctcaTTTAACTTTTGGTGTTTGGGTGTAAGTCTTAACTCGAACTAATTGCCAAAATGTTTAATGGTCTCTGCCGGGTCAGGGTTAATGTTGATTCTCGGTCAACTGTCATTAGACGGTATCCTCTTTGAGCATGTTGAAGAAATCCTGAAGGCATTTGTAAACTGTGAtgtatatttctctctctcacacacacacacacacacacacaaaaatgtttttactttaataaaagcacTTTATTGATGTTTTGGCGCTTCATTAACTGTGTGACAGttgcatagcaacacattaaataataaaggtaTAAAAGCAA

Function

GO: NA

KEGG:

id description
K21437 ANKRD13; ankyrin repeat domain-containing protein 13

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU49270 lncRNA upstream 4392 5859290 ~ 5880529 (+) False G33453
TU49281 lncRNA upstream 14411 5817420 ~ 5870510 (+) True G33454
TU49269 lncRNA upstream 24024 5859290 ~ 5860897 (+) True G33453
TU49099 lncRNA upstream 345523 5526849 ~ 5539398 (+) False G33348
TU49093 lncRNA upstream 345592 5469072 ~ 5539329 (+) True G33348
TU49349 lncRNA downstream 184683 6079083 ~ 6079423 (+) True G33492
TU49363 lncRNA downstream 230930 6125330 ~ 6165323 (+) True G33499
TU49366 lncRNA downstream 271005 6165405 ~ 6165623 (+) True G33500
TU49367 lncRNA downstream 272015 6166415 ~ 6166704 (+) True G33501
TU49368 lncRNA downstream 272334 6166734 ~ 6167250 (+) True G33502
XM_043240906.1 mRNA upstream 27244 5851966 ~ 5857677 (+) True LOC122346201
XM_043239993.1 mRNA upstream 79967 5748118 ~ 5804954 (+) True fam222a
XM_043239994.1 mRNA upstream 79967 5748118 ~ 5804954 (+) False fam222a
XM_043239995.1 mRNA upstream 79967 5748118 ~ 5804954 (+) False fam222a
XM_043240291.1 mRNA upstream 205890 5671285 ~ 5679031 (+) True mvk
XM_043240135.1 mRNA downstream 26174 5920574 ~ 5954193 (+) True sgsm1a
XM_043240139.1 mRNA downstream 26174 5920574 ~ 5954193 (+) False sgsm1a
XM_043240138.1 mRNA downstream 26174 5920574 ~ 5954193 (+) False sgsm1a
XM_043240136.1 mRNA downstream 26175 5920575 ~ 5954193 (+) False sgsm1a
XM_043240140.1 mRNA downstream 62026 5956426 ~ 5958413 (+) True gatc
TU49128 other upstream 235036 5604333 ~ 5649885 (+) False G33355
TU49131 other upstream 235036 5604333 ~ 5649885 (+) True G33355
XR_006250955.1 other upstream 237496 5625267 ~ 5647425 (+) False myo1ha
TU48849 other upstream 1261861 4622507 ~ 4623060 (+) True G33174
TU48610 other upstream 1740525 3605186 ~ 4144396 (+) False G33015
XR_006251052.1 other downstream 65435 5959835 ~ 5978584 (+) False tnpo1
TU49351 other downstream 192862 6087262 ~ 6088562 (+) True G33494
XR_006250986.1 other downstream 353395 6247795 ~ 6254646 (+) False hexb
TU49600 other downstream 578947 6473347 ~ 6474191 (+) True G33664
XR_006251060.1 other downstream 898965 6793365 ~ 6824304 (+) False si:dkey-34e4.1

Expression Profile