RNA id: XR_006251123.1


Basic Information

Item Value
RNA id XR_006251123.1
length 67
RNA type snoRNA
GC content 0.34
exon number 1
gene id LOC122346228
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 6949899 ~ 6949965 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TTGCAGTGATGTCTTGAATTTCTTCACCTGAACTTTTTTGTAGAACACCTTTTCAAAACTGAGCATT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU49676 lncRNA upstream 19114 6929647 ~ 6930785 (+) True G33712
TU49666 lncRNA upstream 28260 6920745 ~ 6921639 (+) True G33708
TU49635 lncRNA upstream 253257 6617276 ~ 6696642 (+) False dab2ipb
TU49603 lncRNA upstream 455369 6475701 ~ 6494530 (+) True G33665
TU49702 lncRNA downstream 30752 6980717 ~ 6981993 (+) False kank1b
TU49863 lncRNA downstream 184329 7134294 ~ 7134884 (+) True G33844
TU49870 lncRNA downstream 184942 7134907 ~ 7135122 (+) True G33850
TU49872 lncRNA downstream 195095 7145060 ~ 7146006 (+) True G33852
TU49873 lncRNA downstream 197070 7147035 ~ 7147616 (+) True G33853
XM_043239749.1 mRNA upstream 4322 6943365 ~ 6945577 (+) True c5h9orf78
XM_043240068.1 mRNA upstream 34486 6857879 ~ 6915413 (+) False garnl3
XM_043240066.1 mRNA upstream 34486 6857880 ~ 6915413 (+) False garnl3
XM_043240064.1 mRNA upstream 34486 6857880 ~ 6915413 (+) False garnl3
XM_043240063.1 mRNA upstream 34486 6857881 ~ 6915413 (+) True garnl3
XM_043239746.1 mRNA downstream 4864 6954829 ~ 6957123 (+) True surf6
XM_043239740.1 mRNA downstream 7308 6957273 ~ 6962389 (+) True kyat1
XM_043239745.1 mRNA downstream 7308 6957273 ~ 6962389 (+) False kyat1
XM_043239741.1 mRNA downstream 7308 6957273 ~ 6962389 (+) False kyat1
XM_043239742.1 mRNA downstream 7308 6957273 ~ 6962389 (+) False kyat1
XR_006251060.1 other upstream 125595 6793365 ~ 6824304 (+) False si:dkey-34e4.1
XR_006251059.1 other upstream 125741 6793365 ~ 6824158 (+) True si:dkey-34e4.1
TU49600 other upstream 475708 6473347 ~ 6474191 (+) True G33664
XR_006250986.1 other upstream 695253 6247795 ~ 6254646 (+) False hexb
TU49351 other upstream 861337 6087262 ~ 6088562 (+) True G33494
XR_006251115.1 other downstream 246 6950211 ~ 6950281 (+) True LOC122346219
XR_006251114.1 other downstream 721 6950686 ~ 6950758 (+) True LOC122346218
XR_006251121.1 other downstream 1325 6951290 ~ 6951366 (+) True LOC122346226
XR_006251122.1 other downstream 1693 6951658 ~ 6951729 (+) True LOC122346227
TU49701 other downstream 28583 6978548 ~ 6981993 (+) False kank1b