RNA id: XM_043241544.1


Basic Information

Item Value
RNA id XM_043241544.1
length 6206
RNA type mRNA
GC content 0.46
exon number 41
gene id tmem131
representative False

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13655260 ~ 13681294 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCGCGCTGCTAGCGTTAAGAGAAACAGCAGCGGCAGGATGGCGAGCAAGGACACAACACAGAGTTCCCCACATCCAACGCGAACAAAATCATCATGCGTTGGACTTCTGCgccttttatttattgcatttattcacGTGGCACAGGCGAACAAACAAGCTTTCATACAGTCAGACAACATCCTGGAGGTACTACACTTTGGGGAAGGAGGCCTCTTGCagACAGAGTCTGATATTGATCTTAGCTCATATCGTCAAAAAAGTGCGTCCTCTCAGCGGGGGAACAGCAGACCCATACGCTTTGAGCCTCCAATGCTGGACTTTCATGAACAGCCAGTTGGAAtgccaaaaatggaaaaagtttaCTTGCACAATCCAAGTTCAGAAGAAATAAGTTTAATATCAATATCAGCAACAACATCACATTTTCATGCAtccttttttcagaataggataaTTCCACCTGGAGGCAACACCTCATTTGATGTGGTGTTTCTAGCTCGAGTAGTAGGGAACGTAGAAAATACCTTATTTATTAACACATCGCATCATGGAGTGTTTACATACCAGGTGTTCGGTGTGGGCATCCCCAATCCCTACAGACTCCGGCCCTTTGTAGGGGCCAGAGTGCCAGTAAATAGCAGCTTCTCTCCACTCATAAGCATCTTCAACCCTCACAGTGAACCACTGCAGgtTGTAGAGATGTACACCAGTGGAGGAGATCTACATTTAGAGCTGCCTACTGGACAGCAGGGTGGCACCAAAAAATTATGGGAGATCGCTCCATTTGAGACGAAGGGTGTGATGAGAGCCAGCTTCTCTTCTCGAGACGCGGACAATCTCACGGCGTTCAtcagaattaaaacaaatgcatccaATGAGGATGAGTTTATCATCCTCCCTGTAGAGGTTGAAGTCACCACAGcaCCTGGTATATACTCCTCCACAGAGATGCTGGACTTTGGTACGCTTCGATCGcaagATCGaccaaaacaactgaatttgCATCTGTTAAATTCAGGATCAAAAGATGTGTCGATCATgAGTGTTAGGCCAACTCCGTCAAATGAAGCGGTCACAGTTGAGTTCAAACAAATTACGCTAAAAGCTGGAGAGAGCCGATATACCAAAGTTGCAAGTATTAGTTTTGATGCTTCAAAAGCTAGAAGATCAGACCAGTTTTCTGGAAAAATAACAGTGAAGGCGAAAGAGAAAAGCTACTCAAAACTTGAAATCCCTTATCAAGCTGAGGTTTTAGAAGGGTATCTGGGCCTCGACCACACAGCCACTCTGTTTCACATACGAGACAGTCCCGTAGATCCAGTGGACAGGCCCATCTACCTCACCAATACTTTCAACTTTGCCATACGCATCCACAACGTGTCACTTCCAGAAGAAGCAAAGACTATGTTCAATGTGCGTAATTTCAGCACACCAGTTCTTATCCCACCCCATGAGTCCCGCTATATTTTCTCCCTTCTATTTCGACCAGTGCGGCCCTCCATCCACATCGACAGCAACATTCTCCTCATCACTAATGCCTCTAAATTCCACCTGCCAGTAAGAGCCTACACAGGCTTCTTAGAGcCTGTTGTGCTTCCTCCCTGTCTTCGAGAGCACATCCTAGACTTTGGTGTTCTTAGTGCTACAGATGCCAGCAGTTTAGTATTTGTGGTGGTTAACAGCAATCCAATTGAGTTGGAGATAAAATCGTGGTTGGTGACAGGAGACAGTCTGTCAATGGAGTTGCTTAATACAGAAAGAGGGAACAGAAGTACGGCACTGAGCAGAACACAAGAGCTGCAGAACACAACAGCCGCCCAATACAAAACCGTCATTTTAGCCTCAGGCTACTATGCAGCATTTAAAGTCACCTTGGTAGCAAAAGCTCTAGAGGGAATTTATGATGGAGCCGTACATATTACAACAGACTATGAGATTCTGACCATCCCTGTAAAGGCTCTCATAGCAGTAGGAACATTAAGCTGTTCACCTAAACAAATCATTCTTCCTCCTTCATTCCCGGGAAAAATTGTTCACCAAGGATTCAGCATACAGAGTTCATTCTCACAGAAAGTAAGGCTTCAGCAAATTCGCTCTCTCACAGAAGACGTCCGGTTTTACTTCAAGCGACTTCGCAATAACAAAGTGGAGTTGGAACCCAGACGAAAGTCCAAGatagcaaacatttattttgatgccAGCTTGCAGTGTGGTGATCACTGTTATGTGGGATTACcgtttgtattaaaatCTGAATCCAGGCCCCATGGTTTAGTTATGCAGGAGGACATATGGGATGCTGATGTAGATCTACATCAGCGGCTCCTTAAAAGATGGCGAGAGCTCAAAGAGCAATCAGGCCTCGAggttgaagcTTTCTTTGAAGTGAACACAGATCTGCAGAAGAATGTGCAGGCCAAGATCTTAGCGCAGCTCACATGGCCCTTGCTGGTCAACTCATCACAACAGATTCATTTTCCTCTCACAAACACCAACAGCTCATCGGAAGAGGAAGTTATTCTAGAAAACTCGGCTGACGTCCCAGTCTACGTTCAGGTTCTTCCTGTGGCGCTTTACCCGAATCCCTCAGTGTTCACAGGCAGACTTGCTGACAAGTTTCCTTTAGGAAAGTTGTCTAACATCAACATTGACACGAATACACTAGAATTCCAGGTTTATAAAAATCACTCTTCAGTCATGAAGAGTTCCACAGGATTCGTTGAAGGTTTAAGTCGGCCCTATGTATACAACGTGCTTCTTATGCCTGGGGAGGTAAAGTCCTTCAACGTGAGGTTTAGACCCATCACCAATCATAGTGTCTCTTCTCTGCTAGTCGTCAGGAACAACTTGACGGTGGTAGACTTGATCATGGTTCATGGTCAAGGCACCACAGAGAGTCTGAGACTGGCTGGTAAAACCCCAGGTCTCGGCAGCTCTCTGAGGTTTAAGCTCACCGAGGCATTTCTCAAAGACTGTTCAGAAGctaaagcCAAGGAACCAAACTTCACTCTTCGAAGGACTTTCAGGTTGGAGAACACAGGGCTTCTTCCAATACACATTCGATCTATGGAGATCAGTGGCAATGCTTGTGAGGGTTATGGCTTCAAAGTTCTCAACTGTGAAGAATTTGCACTCAAACCAAACACTTCAAAAGACCTCGTCATACTGTTTACACCAGATTTCACATCATCCAGAGTGATCCGGGAGCTGAAGTTGGTGACTGCGGGGGGTTCAGTGTTTGCGTTTGTGCTGAATGCGTCATTGCCATATCACATGCTGGCAGTGTGTGCTGAGACCCTTCCCCGACCCAACTGGGAGCTTGAGCTCTACATCATTGTCTCCCTCATTATGAGCTCCATGTTTCTGCTTGTCATCGCTACTGCCTATCTCGAGGCCCAGGGAATATGGGAGCCTTTTAAGCGACGGCTGTCTGTGGAATCCAACTCTCCCGTGGAGACTGGAAAACCATTTGATCTCAGGGAAATTGTACGAATTCAAAGTGATGCTAACTTGAATGATTTTGCCGACTCAAACCAGAACTCGACAAGAGGAATGTACGGGTCAAGCGGTGGCGGCCGGGCTGGGGGTCGGCAGGGTGGTCCGCACTCCAGTTCCAACAGCAACGGCGTTCTGCCAGACAGCAAGCCCAGATCTGGTTCAGGCCGCTCTGGATCTATGCAACCCTCCTCCAGCTTTCCGCTAAATAAAGATAGTGGCCAAGGACTCAGCCAGCTGACTAACCGAAAGGCCCGGAGTtccaaacagcagcagcagggcTCAGGCCTCCTGGAGGACCTCCCGAGCTCAGGACCTTCACAGTCCAACAGAACAAGGGCCAACAGTACAGAGGAACAAGATTTCAACAGACTCCTGGCAGCCATGGATAAAGACCTCGACAGGCCAGAGTCCCCAGCCGTTAATgcgtcttcagaacacaattcaCAACAGTCTTCACAAAACAAAGtgCTTGAATCAAAAGGGAAAgtgaagaataaaacaaaagctctcaaaaagaaagaggagaaagagaggaaaacaaagGGAAAGACTCAAGGAGAAGATTTAAAAGAGCCCCTCGCAGACAACGATGACAGCTCTTCtactaccacagagacctcTAACCCAGACGTGGAGGCCAATATAAAAGAGGAGCCAGTGAAGGTGAAAGGAAAATCTGTGTCAGTGGACattggaaaagaaagagaagaaattaCTCCCTCCCCaactaaaccaaaaacaaagaaacaaccATCCACAAAGAAGGAGAATCCAGTGGAAAAATCCAGCTCTCTAGAACTCCCTTACGTCACTCCCCTGGAAAAACAGGATAAGCAGCGCAAGACCTTCACCAAAACCCTCGCCAATACAGGAATTCACAATGTCCCCAAACCACGAGCTCTGAGCAAAATCAGTGGGAAGATGAGCGATGATCGGCCATCTCCGCTTGGGAAGTTTGCGGTCAATGGCTCCATGCAGGAACTGGGTCATAGCAGCGGAtcagaaggagagaaagagtcCCCCCCACCAGAATGGGATGTTCCTCTCAAAACTGTCAACCCGGACAGTCTTCAGCAGATATCTATGCAGACTATGCATGCAGACTCCTTTCTGAAAGGCCCCAGTTCAGTCATGTCCAGAACCTGTTCCCCACCCCCGACCTCCCCTAGCTTGGTGCCTCGTGGAACCTATGGCAGTGCGCCGCAAACCAGCAGTGAGGCCAATTTGAAGAAGGCTCCAGGGAATAAGCTCACCAAGTCTGCCTCTCTGCCTGGTCAAAATGGAAATCCAACTTTTGCAGCTGTAGCTGCTGGCTACGACAAAAGCCCTGGTGGCAGTGGCTCAGCTAGTAAAGCTGACAGTCTGGGGAAGGTGACACTATCTCACATGACATCAGTGGAGAGCGATGGATCTGACAGCTCTGGACTGTGGAGCCCGATAGACACCACCAGCAGCCCCAGTTTTGGACCGGTTAACGCTTTTTCTGCTTTCGGACCCAACAACCCACTTAATCTTTCTGGAGTTTTCAGAGGCATGACTGTTCCCAAGAGTTCTGAGCCCCAGCAGAGTTGGCCAGACTACACTCCAGTGTCCCCGTCCATTTGGGAGAATGAGCCTAATAATTCCTGGGCTACCAGCACTGGATCTCCAGCAACTCCAACAACTTCCATTTTGGGGAGTGCGCGCAGTCCTTGGTCCTTCAGCAGGTCCATCTGGTCCACTGGCACTGACTCCACCCTGCACTCCTTCAGTCCTCCTACCTCCTCCGCTCTCCCGGACCTGGTCAGCCACACTGCACCGCCCACACCTGCCCCCAATGACATAGGCCGCACCTACAACCCCTGGAGCATGGGGTGGTCTCCCTCACTCAATCGCTGGAACTCGGAGCCCTGGCCTAACAGCCCCGACAAAAACAACGGCATCTGAGAAGCAACAGAAAATGCAGTGGTTtctaatcttattttatttttcctggtTGAACATTATGTTGTTACACCAAGATCATTTTAATGATTGGAAGAAATCTTGAATTGCAATGGTACAAATGTCCGCTGGAAACCCAGTGTTGCATTTACAAGTCCCCCCTCAAAATACAATCCTATTTATTTTAGTGGGGTATAAAAATGCCTTAAGTTCAGTTTTAGCTGACAAAGCGAAAGAAAGATTGAAGACATTGGCTTAATGCTATTGCCCTGGTAAGGGTGTTTTTCTTTTACGATTTTAGAGACTCCCTGTTTTGAGTAATACTGCATTGGAATTAAAGTATATGTTCCAGTATTATGGTATTAAAATGCAAGATGCAGTGTTACTCAACCTTAAAATAAGCACTTTGTGTAAAACCCCACTCCTACAATGCTGTCATTTTGGTTTaagatgttttcattaattttagaGCATTTTCTGGCcatatttgttgtttgattTAACGTTTTGAAAGATACAAATGGTTGCTAAGACTACAGTTACCGCAATGATTTGAACCCCTCTGAGTCGAAGCCaaattgtaaatgcattcaggattcagattttatttttattttaattgcccTCTGCTTAAAGTGAAAAGCTTCATTTGCTGAAATTGGCTTTTAATTTGAGGGAGCTTAAATAACTTGAAATGTGTTCTGTGCATCATTCATTTGTCACTTCAAGAGTGAATGTTTTGGTCACATTGGTTGAAATAAACATATCAGGCTGGAATGTtcaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU66619 lncRNA downstream 43667 13536944 ~ 13611593 (-) True G45014
TU66532 lncRNA downstream 297739 13356987 ~ 13357521 (-) True G44942
TU66531 lncRNA downstream 300477 13354307 ~ 13354783 (-) True G44941
TU66530 lncRNA downstream 301080 13353915 ~ 13354180 (-) True G44940
TU66529 lncRNA downstream 301610 13353364 ~ 13353650 (-) True G44939
TU66648 lncRNA upstream 12044 13693338 ~ 13694164 (-) True G45036
TU66652 lncRNA upstream 16205 13697499 ~ 13697711 (-) True G45039
TU66661 lncRNA upstream 36908 13718202 ~ 13722531 (-) False pex5la
XR_006251212.1 lncRNA upstream 142378 13823672 ~ 13835591 (-) False LOC122347350
XR_006251213.1 lncRNA upstream 142378 13823672 ~ 13835591 (-) False LOC122347350
XM_043241545.1 mRNA downstream 16315 13607613 ~ 13638945 (-) True nme7
XM_043241546.1 mRNA downstream 16317 13607516 ~ 13638943 (-) False nme7
XM_043241276.1 mRNA downstream 69892 13578792 ~ 13585368 (-) True dpt
XM_043242247.1 mRNA downstream 85338 13562045 ~ 13569922 (-) True zbtb11
XM_043242776.1 mRNA downstream 94235 13543207 ~ 13561025 (-) False dipk1ab
XM_043242700.1 mRNA upstream 9732 13691026 ~ 13692826 (-) True mrpl47
XM_043241824.1 mRNA upstream 41015 13722309 ~ 13785903 (-) False pex5la
XM_043241826.1 mRNA upstream 41015 13722309 ~ 13785901 (-) False pex5la
XM_043241825.1 mRNA upstream 41015 13722309 ~ 13785901 (-) False pex5la
XM_043241823.1 mRNA upstream 41015 13722309 ~ 13785901 (-) True pex5la
unassigned_transcript_1263 other downstream 187321 13467868 ~ 13467939 (-) True trnaa-cgc_55
unassigned_transcript_1262 other downstream 187695 13467494 ~ 13467565 (-) True trnaa-ugc_115
unassigned_transcript_1261 other downstream 188034 13467155 ~ 13467226 (-) True trnaa-ugc_114
unassigned_transcript_1260 other downstream 188203 13466986 ~ 13467057 (-) True trnaa-cgc_54
unassigned_transcript_1259 other downstream 188395 13466794 ~ 13466865 (-) True trnaa-cgc_53
TU66983 other upstream 479181 14160475 ~ 14193166 (-) True G45257
TU67455 other upstream 1647673 15328967 ~ 15330817 (-) False LOC122347580
TU67521 other upstream 1922616 15603910 ~ 15605470 (-) True G45606
TU67688 other upstream 2377674 16058968 ~ 16059767 (-) True G45730
TU67689 other upstream 2378599 16059893 ~ 16060466 (-) True G45731