RNA id: TU91913



Basic Information


Item Value
RNA id TU91913
length 705
lncRNA type inter_gene
GC content 0.47
exon number 12
gene id G62076
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 8427285 ~ 8430135 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCTGCTCGTGGAAGAGAAAGGTTGAATATGCCGAGGACTGAACGCAGGACGCCACTGgaCTGTGGATGGGTGACCTAATGGGTGTGGGGCAGCGGTGACTCCAAGGAACGCTAAACTGGAAAGCTGTCAAagGAACCCTAGCAGTGAGACTGAATCAAAAGGTTACGATACTGCTACAGGAGGGGTGCCATCAGCTGAGCACGCTATACTTCTACAGGGGCACAAGGCTTTCTGCTGGAATTTCACTGGGGAGCTAGCCTGTCCAGCTGTGACTGTTCACGgCCTGATGGCCAGCGTTTGCTGATGAGTCACTGTGTCATGGTGGCCATGTGGCATTTTGAGATGGGGTGTGAAGTGAGACTAAGTTAACTAACTCCTTCACATGGCTTAAAGGTGCTTGTGAACATGGGAGATTCAGTATCTTGATGACTGGACAGACTGCTGAAAATGGCTGCTTGCATCAgaccccctttttttttttttttttttttccccaattaaAATGTGCAAGTTATCTACATCTGTGACCTACGAGTTTGTAATGTTATTACTTCAATAAAGTGGTGAAATCAAAGGTCCTTCTCATTTATGACATACTTGATGTATGGGTTGATTAAACTGTTCAACATCTTAACACTTTGGCTCTGTCGCATGCACTCACACTTGGGGCCTGGTTCCATAGCTGGATCTTAGCCTACACCAGGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006251686.1 lncRNA downstream 158068 8253538 ~ 8269217 (-) True LOC122351107
XR_006251685.1 lncRNA downstream 158068 8255469 ~ 8269217 (-) False LOC122351107
XR_006251572.1 lncRNA downstream 194511 8217019 ~ 8232774 (-) False LOC122350139
TU91781 lncRNA downstream 209868 8210043 ~ 8217417 (-) True LOC122350139
TU91770 lncRNA downstream 453265 7879417 ~ 7974020 (-) True G61967
TU91990 lncRNA upstream 77756 8507891 ~ 8508123 (-) True G62120
XR_006251637.1 lncRNA upstream 281902 8712037 ~ 8739931 (-) True LOC122350893
TU92069 lncRNA upstream 282088 8712223 ~ 8739953 (-) False LOC122350893
TU92070 lncRNA upstream 282088 8712223 ~ 8713432 (-) False LOC122350893
TU92189 lncRNA upstream 483347 8913482 ~ 8914004 (-) True G62239
XM_043247881.1 mRNA downstream 579 8422739 ~ 8426706 (-) True tor3a
XM_043247751.1 mRNA downstream 5090 8417430 ~ 8422195 (-) True calr
XM_043246729.1 mRNA downstream 10732 8392345 ~ 8416553 (-) False eps15
XM_043246730.1 mRNA downstream 10732 8392345 ~ 8416553 (-) False eps15
XM_043246728.1 mRNA downstream 10732 8392345 ~ 8416553 (-) True eps15
XM_043247873.1 mRNA upstream 1058 8431193 ~ 8457234 (-) False osbpl9
XM_043247872.1 mRNA upstream 1058 8431193 ~ 8457234 (-) False osbpl9
XM_043247871.1 mRNA upstream 1058 8431193 ~ 8457234 (-) True osbpl9
XM_043247875.1 mRNA upstream 1058 8431193 ~ 8449770 (-) False osbpl9
XM_043247874.1 mRNA upstream 1058 8431193 ~ 8447471 (-) False osbpl9
XR_006251596.1 other downstream 10732 8392345 ~ 8416553 (-) False eps15
TU91784 other downstream 209868 8117008 ~ 8217417 (-) False LOC122350139
XR_006251629.1 other downstream 739723 7678416 ~ 7687562 (-) False spata6
TU91479 other downstream 1326353 7094898 ~ 7100932 (-) False lhx4
TU91442 other downstream 1610561 6814488 ~ 6816724 (-) False LOC122350104
TU92042 other upstream 217146 8647281 ~ 8649965 (-) False mrps36
TU92043 other upstream 217146 8647281 ~ 8649965 (-) True mrps36
XR_006251592.1 other upstream 222291 8652426 ~ 8657286 (-) False pola2
XR_006251623.1 other upstream 827817 9257952 ~ 9262826 (-) False mindy4
TU92748 other upstream 1524615 9954750 ~ 9961701 (-) False mllt1a

Expression Profile