RNA id: TU92203


Basic Information

Item Value
RNA id TU92203
length 1406
lncRNA type inter_gene
GC content 0.43
exon number 4
gene id G62250
representative True

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 9030865 ~ 9038700 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TTGATCTTAAATTTTGGCGTGATGTAATCTTGTTGGTAAGTTTTTGCTACAGCACGAGCAAAGTTTGATGTCTGTGTCGTTCGTGTAGTGCTCGCGCGACGCCGCGTGGACCGGTCTAATCTTTTCGCGATGCACACCACAGTGGGATATGCGCTCAGAAAACTTTCTGTTTATGTATCAGCTGTGGCAATTCTTATATTTTCGTGCATATAACCCTGTTGAAACTCCTGTCACTCGGTTCCCCGGGACTGATGACGAGAAGTCGACGATGACTCAAAATCCCGCTGGGCCTGGAGGCGTTTTGAGGGCCGCGCTGCTCCGGGAACAGTCTTAAAGATGCTTGGTCTTTTGCAAACAACGTCGACATCAGCGTGCACAAAAACTTGGAGGAGAGACTGGCTGCAACCACATATaagttaattaattagtaaTGCATTACACCCAACACTGTTACTGATGCAGTCTTCTTCACAGGAAAACGTCCGCTGGTTCTCAGTTTTGGAAGCTGCACATGACCCCCATTTCTCTACAAGCTTGACGAGTTCAAACAACTGGTCAAGGACTTCAGTGATGTGGCAGATTTCCTCATTGTTTACCTTGCAGAAGCGCATGCAACTGATGCTTGGTCCTTTGCAAACAACGTCGACATCAGCGTGCACAAAAACTTGGAGGAGAGACTGGCTGCGGCCGGACCCTGGCCAAAGAAGACCCCCTTTGCCCCGTGGTAGTGGATGAGATGAGCAACATCACTGCCAGCAAATACGGAGCCCTGCCTGAGCGCCTCTATGTCATTCAGAGCGGGACAGTTATCTATCAGGGTGGCATCGGACCTTGGGGGTACAACCCTGAAGAGGTTCGAAACGTTCtggagaaaatgaattaaaagggaaaaaatggaAGTGTTCTGTCCAAGATTGCATTGCATCTGAAATTCTAGTGCCTGAACTCATTTTGTGAATCCTTGTGTTTGCTTGTGACAGGTACAGATTAAACCATCCGGTCTCTGTACCTTGATGTTTCAAATACATGGAATGTGAAATATAAGTAGATGACAGTATCCTTAGCGTATATTTTTGTATgccatttgtaattttttatttttgcagtttgttattaaacattgatttatattttctgctttaatgCAAATGCATAATTATCATACCAGCATCATATTCAAAGCCTGTGATGAATATCCAACAGCAGAGATTGTGAAGGGCATCTGTGCTTGTAAGATTTTTTTGGAGCTTGTGACTAAATGATGCTTACAGGGTTAAACTGTGTGAACTGTAAACTgattattttagtcatttgttctaaacatattttacagCACAGATTTCACTAAATATTCAGAGTTTTTCTATTCAGCTATTCAAATAAACAGTCATACGTGTCTCATAAGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU92223 lncRNA downstream 23760 9006834 ~ 9007105 (-) True G62263
TU92222 lncRNA downstream 24086 9006555 ~ 9006779 (-) True G62262
TU92212 lncRNA downstream 58092 8968289 ~ 8972773 (-) True G62255
XR_006251681.1 lncRNA downstream 88610 8938318 ~ 8942255 (-) True LOC122351086
TU92194 lncRNA downstream 88664 8936078 ~ 8942201 (-) False LOC122351086
TU92265 lncRNA upstream 44095 9082795 ~ 9085194 (-) True G62293
TU92550 lncRNA upstream 369714 9408414 ~ 9414439 (-) True G62519
TU92551 lncRNA upstream 369714 9408414 ~ 9414439 (-) False G62519
TU92557 lncRNA upstream 487927 9526627 ~ 9526966 (-) True G62525
TU92615 lncRNA upstream 664259 9702959 ~ 9703191 (-) True G62564
XM_043247013.1 mRNA downstream 12865 9009726 ~ 9018000 (-) False acot11b
XM_043247011.1 mRNA downstream 12865 9009726 ~ 9018000 (-) False acot11b
XM_043247010.1 mRNA downstream 12865 9009726 ~ 9018000 (-) True acot11b
XM_043247014.1 mRNA downstream 12871 9009726 ~ 9017994 (-) False acot11b
XM_043247015.1 mRNA downstream 24862 9002221 ~ 9006003 (-) True fpgt
XM_043247367.1 mRNA upstream 71691 9110391 ~ 9113350 (-) True rps8b
XM_043247906.1 mRNA upstream 74787 9113487 ~ 9116378 (-) False elovl8b
XM_043247905.1 mRNA upstream 74789 9113489 ~ 9116378 (-) True elovl8b
XM_043247903.1 mRNA upstream 77920 9116620 ~ 9121780 (-) True mutyh
XM_043247904.1 mRNA upstream 77949 9116649 ~ 9121776 (-) False mutyh
XR_006251592.1 other downstream 373579 8652426 ~ 8657286 (-) False pola2
TU92042 other downstream 380900 8647281 ~ 8649965 (-) False mrps36
TU92043 other downstream 380900 8647281 ~ 8649965 (-) True mrps36
XR_006251693.1 other downstream 601091 8429694 ~ 8429774 (-) True LOC122351130
XR_006251694.1 other downstream 601321 8429474 ~ 8429544 (-) True LOC122351131
XR_006251623.1 other upstream 219252 9257952 ~ 9262826 (-) False mindy4
TU92748 other upstream 916050 9954750 ~ 9961701 (-) False mllt1a
TU92747 other upstream 923097 9961797 ~ 9969485 (-) False mllt1a
TU92903 other upstream 1350483 10389183 ~ 10392043 (-) True G62760
TU92984 other upstream 1402064 10440764 ~ 10478685 (-) False G62826

Expression Profile