RNA id: TU92223



Basic Information


Item Value
RNA id TU92223
length 272
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G62263
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 9006834 ~ 9007105 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TTGAATCGAACAGGAAGAGACAAGTTTTGTACGATTTCCTCATCAGAGATGACAAAGTTGTCCAAGGCCTTCAATGACCATATGCTGTTGACCAGACAGTGCCTGTAGCTCTTCTTTAAACTGAGCGGGGTGTCATAGAGAGTTAAAGCAGTCAGTTTTAAACAGCCAGACAGGCCTTTAATACTGTTCCAGGTTGACATGTTGTTGTCGTGTAGATACAGAAGTTGCAATTCTTTCAGATTATTCCAACATGAAGCATCAGGGAGCTGAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92222 lncRNA downstream 55 9006555 ~ 9006779 (-) True G62262
TU92212 lncRNA downstream 34061 8968289 ~ 8972773 (-) True G62255
XR_006251681.1 lncRNA downstream 64579 8938318 ~ 8942255 (-) True LOC122351086
TU92194 lncRNA downstream 64633 8936078 ~ 8942201 (-) False LOC122351086
TU92191 lncRNA downstream 85138 8921481 ~ 8921696 (-) True G62241
TU92203 lncRNA upstream 23760 9030865 ~ 9038700 (-) True G62250
TU92206 lncRNA upstream 23760 9030865 ~ 9038464 (-) False G62250
TU92265 lncRNA upstream 75690 9082795 ~ 9085194 (-) True G62293
TU92550 lncRNA upstream 401309 9408414 ~ 9414439 (-) True G62519
TU92551 lncRNA upstream 401309 9408414 ~ 9414439 (-) False G62519
XM_043247015.1 mRNA downstream 831 9002221 ~ 9006003 (-) True fpgt
XM_043247006.1 mRNA downstream 4872 8991343 ~ 9001962 (-) True tnni3k
XM_043247484.1 mRNA downstream 30894 8972793 ~ 8975940 (-) True LOC122350776
XM_043246900.1 mRNA downstream 72090 8922693 ~ 8934744 (-) True st6galnac5b
XM_043247013.1 mRNA upstream 2621 9009726 ~ 9018000 (-) False acot11b
XM_043247011.1 mRNA upstream 2621 9009726 ~ 9018000 (-) False acot11b
XM_043247010.1 mRNA upstream 2621 9009726 ~ 9018000 (-) True acot11b
XM_043247014.1 mRNA upstream 2621 9009726 ~ 9017994 (-) False acot11b
XM_043247367.1 mRNA upstream 103286 9110391 ~ 9113350 (-) True rps8b
XR_006251592.1 other downstream 349548 8652426 ~ 8657286 (-) False pola2
TU92042 other downstream 356869 8647281 ~ 8649965 (-) False mrps36
TU92043 other downstream 356869 8647281 ~ 8649965 (-) True mrps36
XR_006251693.1 other downstream 577060 8429694 ~ 8429774 (-) True LOC122351130
XR_006251694.1 other downstream 577290 8429474 ~ 8429544 (-) True LOC122351131
XR_006251623.1 other upstream 250847 9257952 ~ 9262826 (-) False mindy4
TU92748 other upstream 947645 9954750 ~ 9961701 (-) False mllt1a
TU92747 other upstream 954692 9961797 ~ 9969485 (-) False mllt1a
TU92903 other upstream 1382078 10389183 ~ 10392043 (-) True G62760
TU92984 other upstream 1433659 10440764 ~ 10478685 (-) False G62826

Expression Profile