RNA id: TU92749


Basic Information

Item Value
RNA id TU92749
length 1918
lncRNA type sense_over
GC content 0.37
exon number 1
gene id adamts10
representative False

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 9995547 ~ 10041769 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TTACATCTGTCTTGaagattttcagcaaaaaaatcCAGTCATTTCAATAGGGATTTTACTTAAGAGACACAGATTTTGCAATGAATTTGGCAAGTTGTGCAATCACAACGTTGAGCTGCTTGTTTTTTACGCAGCTTGTATTTGAGCTGCACATTGTACATTGCTACCCTATGCTAAACAATCGaccttttgcaaaaaaaaaatcgctgAAAATTCCCTAATGTGAGCGCACCTTAATGCTTCAGGATACAGATGAATTCTTTAATTGAGTAGGAACATTTCCGAGCAGTGACTTGTTGACATTAAACAATTGCTGTCTGTGTGAACTGCCCTTATGAGACACTCCAGATCACTCAGATATCATAAGCTCTCATTCAGTGTGGTTGGTGCTGAGATACTGTATCTTTTAATCTGATGGCCTTGTGGCTATTTGCAGGTGCTGTGCCGTTTTCTTGCCATCCGGTCCCATAATGCTTACATTAATTAACCATAAGATATAAGTGCATCAGTCAAATCTGGATGAACAGTGAACTGTTCGGCAAACAGAGGGAAACGAGAGGTAATGTCAGTTTAGCTTCTGTGCACAAATTAAAAGTAGATGAAGAGGCCAATGGAAGATGTTGTTGAACCATGTGGtggttatattgtttttttgtttttttttcagacatttttttttacccaagataatgttctttacttttaatGCACCACAAGCCTGCATGCAGCATGCAATTGTGATTGTGCAGAATTGCGACCCATGTAACTTTCTAGTTTCTGGGctgtttctctttcattttattagGTCAGAAACAAATAGTCATTCTATCACCctttgataaaaatgaaaattctgcaaTACTTGACCTTATGTTGTTCAAAACCAAAAGAGTGTCCAAGCTGCTGTATTTCATACAGTGGATTGATGAAACACAgttgagattttaaaaaagcagttaTATTCAAATTCCTCTAACGCCACCTAATAGGTTTACATAGGTAAAACACCAGAATTTAAGTCCTTATTTGTTGTCATAATGCAAAACCAACGACATTTGAATTTGCACTTTCAGAGAAGGGGACGAATTAGGGAACTAAtcttttttgctcattttactTTGGGTCCGTTCCTCACAAAAGAACGCATGTTGCTTCACAAGGGTCTGGAACAGCATAACGgtaattaaatgacagaattgtcattttttggtgaaatctTACAACTTTCAAAGTGTTTTCATAACATTTTGATTGGGACTCAAAATTTCCTTTTCCACATTTCTACCCCAAATATCAACATTTAGCTCACATTTGCCAACTTATTTGTGTCAGTCACAATTAGAGAGCCGTAACAGACCTTCTCTCCGTCCTGGGTCCTGGCAGCACTCAACGAATGTTTGATTAGAAGAGCAGATCTTGAAGAGGTGGCCCCCGTTCAAGGACTGGTGGCTAATCTGCGGTGCTACAGTATGGTGCTATGTCTTTAATTGTCGCAATCTCGAGattcaagttatttttatattgtaggGATTGTTTTGCTAACGGTAATACATTTgctaaggaaaaaaatatataagcaaGATTCTATGAAAACTAGAATTATTGTTAAAAGTCTCTCTGTAGAGACACTAACTTTGTAATCATTCTTTGGTACAATTATTATGTGAAAgatgaaaatgctgttttgcttttgatGGTAAGCTTTTTATCCTTACATTGCAGTGTGTTCCTACATTTGCAATAACTGTAGATTCACTTTGGAATTGCAGTCACACTTGTTTATTTGGACTttgtttaatattgattttCACTTGCTACCCAGTAACTTGCTGTACTGTCAAGTACTTGTGATGTAGTGTATGTCCTCCGAATTGTATGTAGACCAGTTGAAACGAATTtgaaatgctgaataaaaaga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU92632 lncRNA downstream 263413 9731906 ~ 9732154 (-) True G62576
TU92619 lncRNA downstream 284571 9710646 ~ 9710996 (-) True G62568
TU92618 lncRNA downstream 286346 9708973 ~ 9709221 (-) True G62567
TU92617 lncRNA downstream 287373 9707773 ~ 9708194 (-) False fam78bb
TU92616 lncRNA downstream 291969 9703376 ~ 9703598 (-) True G62565
TU92768 lncRNA upstream 45704 10043188 ~ 10043398 (-) True G62670
TU92889 lncRNA upstream 57567 10055051 ~ 10057928 (-) True G62749
TU92911 lncRNA upstream 79933 10077417 ~ 10077652 (-) True G62768
XR_006251619.1 lncRNA upstream 130401 10127885 ~ 10150991 (-) False LOC122350767
XR_006251618.1 lncRNA upstream 130401 10127885 ~ 10150991 (-) True LOC122350767
XM_043247334.1 mRNA downstream 459 9979636 ~ 9995108 (-) True myo1f
XM_043247333.1 mRNA downstream 669 9979636 ~ 9994898 (-) False myo1f
XM_043247335.1 mRNA downstream 6913 9979636 ~ 9988654 (-) False myo1f
XM_043246366.1 mRNA downstream 18805 9970128 ~ 9976762 (-) True acer1
XM_043246038.1 mRNA downstream 26107 9954681 ~ 9969460 (-) False mllt1a
XM_043246026.1 mRNA upstream 248377 10245861 ~ 10248156 (-) False smim24
XM_043245989.1 mRNA upstream 256406 10253890 ~ 10256950 (-) True dohh
XM_043246080.1 mRNA upstream 259661 10257145 ~ 10259192 (-) True LOC122349939
XM_043247660.1 mRNA upstream 267357 10264841 ~ 10271997 (-) True haus5
XM_043246948.1 mRNA upstream 282819 10280303 ~ 10284362 (-) False si:dkeyp-82a1.6
TU92747 other downstream 26082 9961797 ~ 9969485 (-) False mllt1a
TU92748 other downstream 33866 9954750 ~ 9961701 (-) False mllt1a
XR_006251623.1 other downstream 732741 9257952 ~ 9262826 (-) False mindy4
XR_006251592.1 other downstream 1338281 8652426 ~ 8657286 (-) False pola2
TU92042 other downstream 1345602 8647281 ~ 8649965 (-) False mrps36
TU92903 other upstream 391699 10389183 ~ 10392043 (-) True G62760
TU92984 other upstream 443280 10440764 ~ 10478685 (-) False G62826
unassigned_transcript_1293 other upstream 542735 10540219 ~ 10540291 (-) True trnar-ccg_26
TU93206 other upstream 989962 10987446 ~ 10990704 (-) False cep104
TU93213 other upstream 1099518 11097002 ~ 11131207 (-) False LOC122349915

Expression Profile