RNA id: XM_043247916.1


Basic Information

Item Value
RNA id XM_043247916.1
length 7572
RNA type mRNA
GC content 0.44
exon number 25
gene id adamts10
representative True

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 9995547 ~ 10041769 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TGAAGGAAGCAGAGAAACCAAGCAGCACCAGAGCACAGTCCACCGGCTCATCTCATTATGCGGCAGAGAACTACCGGGTGTTGAAGGAGGACGACGGACCAGACGGAGGTCGGCAAATCTCAGGGTCGCCAAATTGCTCGCTCCTGGACAATTAAACGGGAGACTCTTCATATTTATGATCCCCGGTTGTACACATCTTAGAGCTGCCCGTCCTCCACCTCCAAACCAGAGAGGCGAAGCGTCAGGATCCTCGTAGAAGCGAAGCCATCATGGCTCCAGAATTCTGTGCGTCACTTTGGTGAGCGTGGGGCCGTCAGAGGGCAGAAGACATGTTGGGACAGAGGGCTGGGCACCGCATTGAAGCTTGCTGTAGTAACCATGGAAACGATGTGGAGGAGTTTGGCCTGCGTTGGCATCATCGCCATGGTTGCCAGGGGAGTGGCCGAAAGTTGGAGTCCTGAGGAGTTCGCTCAGTCTCAAGCTGAGTTTCTTTCCAGCTTGGGCCAGTATGAGATCGCCATCCCAGTGCGTGTGGGGCCGCATGGGGAAACGCTATCGGAAGAGGAGACCTCTCACAGGAATGGCCGACATCGACGTAGCACGGAAACGCAGAGCGTTCCAGAGCCGCAGCTGTACTATCAGCTCTCCACGTCGAGCGCTGACCTTTTGCTCAACCTCACGCTGCAGGGAGGACTGCTCTCGCGACAGTTCCGTGTGGAGTACTGGAAGAGGGGCCGCTTGGCTTGGAGTCACCCATACTTGCCCAGCTGCCACTATGTGGGTCACCTACAGCACCAGCCCCATTCTAGTTCTGTGGCTCTTAGCAACTGTAATGGCCTGcaagggGTCATTGTAGCTGGAGGTGAGGAGTACCTTATCGAACCCCTGGTTTCTGCTAAAAACTTCACTAATGAGGATGGCAGAGAAGGGCGCCCCCATGTGGTGTATAAACGGTCATCTCTAAGATACCAAAACATGGACCAGTCCTGTGGAGTCATCGatgaaAAGCCTGGTAAAAGCTATGGATGGTGGCAGAGAACAATAAAGCCCTCACCCAACCAGATGGGACGGGGGCAATTACCACTGAAGCGTTCTGTCAGCCGAGAGCGCTACGTCGAAACCCTGGTGGTGGCCGACAAGATGATGGTCAGCTATCACGGCCGTCGCGATATCGAGCAGTACATTCTGGCCGTCATGAATATTGTTGCCAAACTGTTCCAGGATTCTAGCCTGGGGAACGCAGTGAACATCGTTGTGACAAGGCTTATTCTACTGATGGAAGACCAGCCCTCACTAGAGGTAAACCATCATGCAGGGAAGTCTTTAGACAGTTTCTGCAAGTGGCAAAAGTCCATTCTGCACAGGAACGGACATGGAAATGCCATCCCTGACAATGGAATTGCTCACCATGATACAGCTGTCCTCATCACCAGGTATGACATCTGCATCTACAAGAACAAACCCTGTGGAACACTTGGTCTGGCACCTGTTGGCGGTATGTGTGAGCCAGAGAGAAGCTGCAGCATCAATGAAGACATTGGTCTGGCAACTGCTTTTACCATAGCACATGAGATAGGGCACACGTTTGGGATGAATCATGATGGTGTTGGCAATGCATGTGGGGTGCGCAGTCAGGAGACCGCTAAACTCATGGCTGCCCACATCACCATGAAGACTAACCCGTTCGTCTGGTCTGCCTGCAGCCGCGATTACATCACCAATTTCCTCGActctGGCATGGGTTCCTGCCTCAACAATGTTCCCCCAAAGCAGGAATTTGTTTACCCCACCACAGCCCCTGGCCAAGCATATGATGCAGACGAGCAGTGCCGCTTTCAGTATGGAGTGAAGTCTCGTCAGTGTAAATACGGGgaagTCTGCAGTGAGCTTTGGTGCATGAGTAAAGGGAATCGCTGCATCACCAGTAGCATCCCGGCAGCCGAGGGCACCATCTGTCAGACCAGCACCATCGAAAAAGGGTGGTGCTacaaaagagtgtgtgtgccGTATGGAACACGTCCAGAGGGGGTAGATGGTGGGTGGGGCCACTGGTCGCCATGGGAGGAGTGTAGTCGCACATGTGGGGGAGGAGTCTCATCCTCTATTCGCCATTGTGACAGCCCCAGGCCAACAGTTGGAGGAAAATATTGTCTGGGAGAGAGGAAGCGCTTCAGGTCCTGCAACATTGATGAGTGCCCGGCCGGTTCTCAGGATTTTCGGGAGATTCAGTGCTCGGACTTTGACAGTGTTCCCTTCCGGGGGAAATTCTACACCTGGAAGCCATACAGGGGTGGTGGAGTGAAGTCATGTTCTCTGAACTGCCTGGCGGAGGGCTATAACTTCTACACTGAGCGAGCGCCAGCTGTGGTGGACGGCACACCTTGCAGGGACGACTCTCTGGACGTTTGTGTTAATGGCGAGTGTAAGCATGTGGGCTGTGACCGGATCCTAGGCTCGGATGTTCGGGAAGATCGCTGCCGCATTTGTGGAGGAGACGGGAGCAGCTGCCAGGTCATCGAGGGGGTCTTCAATGACTCCTTATCTGAAGGAGGTTATGAGGAGGTGGTCAGAATCCCCAAAGGATCTGTATTCATACACATCCAAGAGCTCAACGTCTCTCACAATTACTTGGTATTGAAGAATAAAGGGGATCAGTACTTCATCAACGGCAAGCTGACCATCGACACGCCACGACGCTTTGATATCGCAGGAACCACCTTCCACTACCGCAGACCTGCCAATGAACCAGAGACCCTAGAAGCACTTGGACCCACCAACATGACCCTGATCGTCATGGTGTTGGTACGTGAGGAAAATCCTGGGATCCTTTACCGTTTTAACCCACCTGTCAACAGAGATCCTCTGAGCAGTTATGCCTGGCATTATACATCCTGGTCCCGCTGCTCTGCGCTTTGTGCTGGAGGGGTTCAGGTCCAGCAGGTAGTGTGCAAGAAACAAGCCGATCATTCTGTGGTGTACAACCACTTCTGCGACAAGAAGAACAAGCCCAAAGACAAGAAAAGACCCTGCAACTTGGAGCCCTGCCCTCCAACGTGGTGGACAGGGGACTGGTCAGATTGCAGTCGGAGCTGTAACGGAGGAGTGCGTACGCGGGAAGTGCTGTGTAAAAGGAAGATCTCAGTTACGGAGGAAAAAGTCCTGGATGACGCGGCCTGCCCCCCACCTCGACCTTCCATCACCGAGCCCTGCAACAACCACACCTGCCCTCCAGAATGGCATGCCCTTGACTGGTCTGAGTGTACTCCCAGCTGTGGTCCGGGTTACAGGTACAGAGTGATTTTGTGCAGAAGTGGAGAGAATGGTGAAACATTGGCAGAGTTAGAGTGTCCGAAACAAAGCCGCCCGACCACAAGGGTGCGCTGCAACATTCAGCGTTGTCCACCAGCGCAGTGGGTTACGGGACCCTGGGGAGAGTGCTCAGCTAGGTGCGGTATGGGTCAGGAGATTCGTTTAGTGCAGTGTCTGACACACACTGGCCAGCCATCCAATGAGTGCCCTGACACACATCGTCCTGCCTACACGCAGCAGTGCAAGAGCAAATGTGACAGCAGTGGCCCTACAGATAACCCTGAAGAGTGTAAAGATGTGAACACAGTGGCATACTGCCCCCTGGTGCTCAGGTTCAAATTTTGCAGCCGTGCATACTTCAGACAGATGTGCTGCAAAACCTGCCAAGGACactgacctctctctctctctctctctctctctctcacacacacacacactctatgtctctctcttgTCCTCATTTTCTTCCCTCTCCGCCCTCCATTTCCTTGCATGGCCAAAAACGCCCATGCTCTGCATTTTGGAGTGCTGGAGGAGTGCTGTTAACCACTGGCAGACTGACATCATCGCGAGAGAAAGTGCGGGAAGaaatgagagcgagagagagacgtgaaaagtaagagagagagaaagtctgtgctgctctctttctctccctctgacCAGCTGCTTTGGCATTGCTGCTGTGAATACCGGTCTGCCCAAAAGACATCTGTCAGTGTTTCTTTTGCTCTTCCATGAGGTGCTTTCGCCCATCACTGTCATACAGAGAAGTGTCTGTGTGAAATGTCACAGCTGTACTGCTAAATCTCAGTGAATAGTTGTCgtttattattgtaatgtgATAAAAGAAGCATTTATAGACCAATCGTCTTTAGTCTTAAAGGTGCActcagtaatttttttgtgtgtgtggcactGGTTGTTTTGGACTTATACTGACAACTATAGTTTTGGatgaatcattaaaatgaattaaaatgattagttaAGATGGCTATGTGACAATGGCTCATGTGATCATAAGAGACCCACcccatgtaaaataataaaacaactctTGCTTATAGagttatatacttttattttgcatatgtatACAATTTTACTTTGGAAAAACATTATTGAGTGCatctttaaagggataattcacccaaaactgaaaattctatTCACTCagtcttttgtttttacaaacctCCAACTCTCTAGCCACCTGAGAACCTGCATCCTcatatattttagtgaatttctctACTCTATACAGAGACTATACATgccaaatgttttaatttttattgtgcacattcagggctttacAGAGATAATATAAATTTGGTTGTTTCACCATGAACACTACCGTTTCTTTGGTCTTTAACAATGTCTGACATAATTTTATTGACATGCGTAtggaaatatgataatataatgtaattatcatttaaatcgGACACATTTTTAGATTGTGTcagatttaaatgataatttccTCAACATCTGAGGAAAATGTTATAGgtttataatgaaatatgactttctgttacGAAACAGATTTCATACACATCCTCATATGAGGACACAAGACTAAAAACATGTCTATTACGAATTTTGAGAGTCACAACAAATGAATAGGGAAAGAAATTATGTTTcaatatttctgtgaaatattatatattatgtagaaTTATTTCTCCcattattacacttcttttttcattatatgttgccccaaaaacatgttaatatgTAAATTAGATTTATAGATACATTGTGTATAATGAGAAAAGCCATTTATgaccattttacacacattttgcatAAACAATTAGTAATGGTAAATCATAATACAACATTATTCAGAATAACATTATTGAGAATCATGTtcctaaaaaactaaaaatgtattggtgattttaaaaaaagcaaatgtttttgcCAATTCATGTTTGTTCGTATATTTTCTACAATATCCTCTACCAAGGATATAGCTTAACTTATGAATGAAATCCTTTTTTTATGCTCTAAACTATATTCTTACCAGGTCTCAGGAGGCTAGAACACAAAtatcaatttttatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatgcatgataTGCAAAATAATGGTTTagaacataaatgtattttcatttatgggtgaaTTATACCTTTAAGGGCCTTTTCACTTATAGCAATTTGCAAAGCAACCaacagttttttacatttttttataagatTTGATGATTTACAATGACATGCGTAAAGGTGCGGTCACATTTACATCTGTCTTGaagattttcagcaaaaaaatcCAGTCATTTCAATAGGGATTTTACTTAAGAGACACAGATTTTGCAATGAATTTGGCAAGTTGTGCAATCACAACGTTGAGCTGCTTGTTTTTTACGCAGCTTGTATTTGAGCTGCACATTGTACATTGCTACCCTATGCTAAACAATCGaccttttgcaaaaaaaaaatcgctgAAAATTCCCTAATGTGAGCGCACCTTAATGCTTCAGGATACAGATGAATTCTTTAATTGAGTAGGAACATTTCCGAGCAGTGACTTGTTGACATTAAACAATTGCTGTCTGTGTGAACTGCCCTTATGAGACACTCCAGATCACTCAGATATCATAAGCTCTCATTCAGTGTGGTTGGTGCTGAGATACTGTATCTTTTAATCTGATGGCCTTGTGGCTATTTGCAGGTGCTGTGCCGTTTTCTTGCCATCCGGTCCCATAATGCTTACATTAATTAACCATAAGATATAAGTGCATCAGTCAAATCTGGATGAACAGTGAACTGTTCGGCAAACAGAGGGAAACGAGAGGTAATGTCAGTTTAGCTTCTGTGCACAAATTAAAAGTAGATGAAGAGGCCAATGGAAGATGTTGTTGAACCATGTGGtggttatattgtttttttgtttttttttcagacatttttttttacccaagataatgttctttacttttaatGCACCACAAGCCTGCATGCAGCATGCAATTGTGATTGTGCAGAATTGCGACCCATGTAACTTTCTAGTTTCTGGGctgtttctctttcattttattagGTCAGAAACAAATAGTCATTCTATCACCctttgataaaaatgaaaattctgcaaTACTTGACCTTATGTTGTTCAAAACCAAAAGAGTGTCCAAGCTGCTGTATTTCATACAGTGGATTGATGAAACACAgttgagattttaaaaaagcagttaTATTCAAATTCCTCTAACGCCACCTAATAGGTTTACATAGGTAAAACACCAGAATTTAAGTCCTTATTTGTTGTCATAATGCAAAACCAACGACATTTGAATTTGCACTTTCAGAGAAGGGGACGAATTAGGGAACTAAtcttttttgctcattttactTTGGGTCCGTTCCTCACAAAAGAACGCATGTTGCTTCACAAGGGTCTGGAACAGCATAACGgtaattaaatgacagaattgtcattttttggtgaaatctTACAACTTTCAAAGTGTTTTCATAACATTTTGATTGGGACTCAAAATTTCCTTTTCCACATTTCTACCCCAAATATCAACATTTAGCTCACATTTGCCAACTTATTTGTGTCAGTCACAATTAGAGAGCCGTAACAGACCTTCTCTCCGTCCTGGGTCCTGGCAGCACTCAACGAATGTTTGATTAGAAGAGCAGATCTTGAAGAGGTGGCCCCCGTTCAAGGACTGGTGGCTAATCTGCGGTGCTACAGTATGGTGCTATGTCTTTAATTGTCGCAATCTCGAGattcaagttatttttatattgtaggGATTGTTTTGCTAACGGTAATACATTTgctaaggaaaaaaatatataagcaaGATTCTATGAAAACTAGAATTATTGTTAAAAGTCTCTCTGTAGAGACACTAACTTTGTAATCATTCTTTGGTACAATTATTATGTGAAAgatgaaaatgctgttttgcttttgatGGTAAGCTTTTTATCCTTACATTGCAGTGTGTTCCTACATTTGCAATAACTGTAGATTCACTTTGGAATTGCAGTCACACTTGTTTATTTGGACTttgtttaatattgattttCACTTGCTACCCAGTAACTTGCTGTACTGTCAAGTACTTGTGATGTAGTGTATGTCCTCCGAATTGTATGTAGACCAGTTGAAACGAATTtgaaatgctgaataaaaagatGCATTGTGTACAAATAATA

Function

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004222 metalloendopeptidase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K08625 ADAMTS10; a disintegrin and metalloproteinase with thrombospondin motifs 10

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU92632 lncRNA downstream 263393 9731906 ~ 9732154 (-) True G62576
TU92619 lncRNA downstream 284551 9710646 ~ 9710996 (-) True G62568
TU92618 lncRNA downstream 286326 9708973 ~ 9709221 (-) True G62567
TU92617 lncRNA downstream 287353 9707773 ~ 9708194 (-) False fam78bb
TU92616 lncRNA downstream 291949 9703376 ~ 9703598 (-) True G62565
TU92768 lncRNA upstream 1419 10043188 ~ 10043398 (-) True G62670
TU92889 lncRNA upstream 13282 10055051 ~ 10057928 (-) True G62749
TU92911 lncRNA upstream 35648 10077417 ~ 10077652 (-) True G62768
XR_006251619.1 lncRNA upstream 86116 10127885 ~ 10150991 (-) False LOC122350767
XR_006251618.1 lncRNA upstream 86116 10127885 ~ 10150991 (-) True LOC122350767
XM_043247334.1 mRNA downstream 439 9979636 ~ 9995108 (-) True myo1f
XM_043247333.1 mRNA downstream 649 9979636 ~ 9994898 (-) False myo1f
XM_043247335.1 mRNA downstream 6893 9979636 ~ 9988654 (-) False myo1f
XM_043246366.1 mRNA downstream 18785 9970128 ~ 9976762 (-) True acer1
XM_043246038.1 mRNA downstream 26087 9954681 ~ 9969460 (-) False mllt1a
XM_043246026.1 mRNA upstream 204092 10245861 ~ 10248156 (-) False smim24
XM_043245989.1 mRNA upstream 212121 10253890 ~ 10256950 (-) True dohh
XM_043246080.1 mRNA upstream 215376 10257145 ~ 10259192 (-) True LOC122349939
XM_043247660.1 mRNA upstream 223072 10264841 ~ 10271997 (-) True haus5
XM_043246948.1 mRNA upstream 238534 10280303 ~ 10284362 (-) False si:dkeyp-82a1.6
TU92747 other downstream 26062 9961797 ~ 9969485 (-) False mllt1a
TU92748 other downstream 33846 9954750 ~ 9961701 (-) False mllt1a
XR_006251623.1 other downstream 732721 9257952 ~ 9262826 (-) False mindy4
XR_006251592.1 other downstream 1338261 8652426 ~ 8657286 (-) False pola2
TU92043 other downstream 1345582 8647281 ~ 8649965 (-) True mrps36
TU92903 other upstream 347414 10389183 ~ 10392043 (-) True G62760
TU92984 other upstream 398995 10440764 ~ 10478685 (-) False G62826
unassigned_transcript_1293 other upstream 498450 10540219 ~ 10540291 (-) True trnar-ccg_26
TU93206 other upstream 945677 10987446 ~ 10990704 (-) False cep104
TU93213 other upstream 1055233 11097002 ~ 11131207 (-) False LOC122349915

Expression Profile