RNA id: TU92768



Basic Information


Item Value
RNA id TU92768
length 211
lncRNA type inter_gene
GC content 0.29
exon number 1
gene id G62670
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 10043188 ~ 10043398 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AAAGAATCTTAGTGTGTGAATATACATTGTATTTATACTTGGAGAGACTTAGAAACCTCAAACAGAACCcttagttaaaattaaaaagttcaaattgTGTTCTCAAAAGATTAAGAAAAGTATCAACGTGATACGTCAGCGTTATGCTGTTTTAGATTAAAAGAGGCTCGTTTATTAGAACCAAACCcgacaataactttttttattattt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92749 lncRNA downstream 45704 9995567 ~ 9997484 (-) False adamts10
TU92632 lncRNA downstream 311034 9731906 ~ 9732154 (-) True G62576
TU92619 lncRNA downstream 332192 9710646 ~ 9710996 (-) True G62568
TU92618 lncRNA downstream 333967 9708973 ~ 9709221 (-) True G62567
TU92617 lncRNA downstream 334994 9707773 ~ 9708194 (-) False fam78bb
TU92889 lncRNA upstream 11653 10055051 ~ 10057928 (-) True G62749
TU92911 lncRNA upstream 34019 10077417 ~ 10077652 (-) True G62768
XR_006251619.1 lncRNA upstream 84487 10127885 ~ 10150991 (-) False LOC122350767
XR_006251618.1 lncRNA upstream 84487 10127885 ~ 10150991 (-) True LOC122350767
TU92907 lncRNA upstream 91334 10134732 ~ 10138880 (-) False LOC122350767
XM_043247916.1 mRNA downstream 1419 9995547 ~ 10041769 (-) True adamts10
XM_043247917.1 mRNA downstream 13598 9995547 ~ 10029590 (-) False adamts10
XM_043247334.1 mRNA downstream 48080 9979636 ~ 9995108 (-) True myo1f
XM_043247333.1 mRNA downstream 48290 9979636 ~ 9994898 (-) False myo1f
XM_043247335.1 mRNA downstream 54534 9979636 ~ 9988654 (-) False myo1f
XM_043246026.1 mRNA upstream 202463 10245861 ~ 10248156 (-) False smim24
XM_043245989.1 mRNA upstream 210492 10253890 ~ 10256950 (-) True dohh
XM_043246080.1 mRNA upstream 213747 10257145 ~ 10259192 (-) True LOC122349939
XM_043247660.1 mRNA upstream 221443 10264841 ~ 10271997 (-) True haus5
XM_043246948.1 mRNA upstream 236905 10280303 ~ 10284362 (-) False si:dkeyp-82a1.6
TU92747 other downstream 73703 9961797 ~ 9969485 (-) False mllt1a
TU92748 other downstream 81487 9954750 ~ 9961701 (-) False mllt1a
XR_006251623.1 other downstream 780362 9257952 ~ 9262826 (-) False mindy4
XR_006251592.1 other downstream 1385902 8652426 ~ 8657286 (-) False pola2
TU92043 other downstream 1393223 8647281 ~ 8649965 (-) True mrps36
TU92903 other upstream 345785 10389183 ~ 10392043 (-) True G62760
TU92984 other upstream 397366 10440764 ~ 10478685 (-) False G62826
unassigned_transcript_1293 other upstream 496821 10540219 ~ 10540291 (-) True trnar-ccg_26
TU93206 other upstream 944048 10987446 ~ 10990704 (-) False cep104
TU93213 other upstream 1053604 11097002 ~ 11131207 (-) False LOC122349915

Expression Profile