RNA id: TU92911



Basic Information


Item Value
RNA id TU92911
length 236
lncRNA type inter_gene
GC content 0.32
exon number 1
gene id G62768
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 10077417 ~ 10077652 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


aataagtcACACTGCAGGGCCATTTAACCTAAAAACTCacttaaaatggttaaaaactttaaataaacggTGACTATTTGCAGCAAATGattatacattttcacattaGTACCTAGTCCGTTATAGTACTTTTATGAATATGCTATAAATTTTGATTGCatcaataattttaatgtatacCAACAGAATTATAATGGCCCTTGGTTTCTGCACACACGCAGTAGTGGGATCCAAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92889 lncRNA downstream 19489 10055051 ~ 10057928 (-) True G62749
TU92768 lncRNA downstream 34019 10043188 ~ 10043398 (-) True G62670
TU92749 lncRNA downstream 79933 9995567 ~ 9997484 (-) False adamts10
TU92632 lncRNA downstream 345263 9731906 ~ 9732154 (-) True G62576
TU92619 lncRNA downstream 366421 9710646 ~ 9710996 (-) True G62568
XR_006251619.1 lncRNA upstream 50233 10127885 ~ 10150991 (-) False LOC122350767
XR_006251618.1 lncRNA upstream 50233 10127885 ~ 10150991 (-) True LOC122350767
TU92907 lncRNA upstream 57080 10134732 ~ 10138880 (-) False LOC122350767
TU92936 lncRNA upstream 74587 10152239 ~ 10152905 (-) True G62788
TU92937 lncRNA upstream 79323 10156975 ~ 10157193 (-) True G62789
XM_043247916.1 mRNA downstream 35648 9995547 ~ 10041769 (-) True adamts10
XM_043247917.1 mRNA downstream 47827 9995547 ~ 10029590 (-) False adamts10
XM_043247334.1 mRNA downstream 82309 9979636 ~ 9995108 (-) True myo1f
XM_043247333.1 mRNA downstream 82519 9979636 ~ 9994898 (-) False myo1f
XM_043247335.1 mRNA downstream 88763 9979636 ~ 9988654 (-) False myo1f
XM_043246026.1 mRNA upstream 168209 10245861 ~ 10248156 (-) False smim24
XM_043245989.1 mRNA upstream 176238 10253890 ~ 10256950 (-) True dohh
XM_043246080.1 mRNA upstream 179493 10257145 ~ 10259192 (-) True LOC122349939
XM_043247660.1 mRNA upstream 187189 10264841 ~ 10271997 (-) True haus5
XM_043246948.1 mRNA upstream 202651 10280303 ~ 10284362 (-) False si:dkeyp-82a1.6
TU92747 other downstream 107932 9961797 ~ 9969485 (-) False mllt1a
TU92748 other downstream 115716 9954750 ~ 9961701 (-) False mllt1a
XR_006251623.1 other downstream 814591 9257952 ~ 9262826 (-) False mindy4
XR_006251592.1 other downstream 1420131 8652426 ~ 8657286 (-) False pola2
TU92043 other downstream 1427452 8647281 ~ 8649965 (-) True mrps36
TU92903 other upstream 311531 10389183 ~ 10392043 (-) True G62760
TU92984 other upstream 363112 10440764 ~ 10478685 (-) False G62826
unassigned_transcript_1293 other upstream 462567 10540219 ~ 10540291 (-) True trnar-ccg_26
TU93206 other upstream 909794 10987446 ~ 10990704 (-) False cep104
TU93213 other upstream 1019350 11097002 ~ 11131207 (-) False LOC122349915

Expression Profile