RNA id: XM_043247026.1


Basic Information

Item Value
RNA id XM_043247026.1
length 1349
RNA type mRNA
GC content 0.37
exon number 4
gene id ndufaf2
representative True

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 8478681 ~ 8480731 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTAGGTAGTTGTGCAACCTACGGCTCAACGtagatgtgtatgtatgcgCATTAGGAGATAATACATAAACTGATATTTCGTTTATAGAGATGAACCGCATTACGGCTCTGCTGCGAAGAACGTTTGGAGTAGTAAAAGAGCATGTCGGTACAGATCATTtaggaaataaatattattatatacccGAGCAAAAGTCATGGACTGGGCAGGTCATCCGGCCCAAACGCCTAGTAGAAGCAGCCAATCCAAATTACTTTGAGTACATGGAAGGAAACATTCCTACTGAATGGGATGCTTGGATGAGAGGCAGGAGGAAGCAGCCACCTACATTGGAGGAGTTGTTACAGAACGAACGTTCCAGGGAGCAAATCAAAATCAGAGCTATAGATTCAGAGGAGAGGGATAAGGCCTTGCAGGTCAAAGAGTATGAGGAAGGTTTGGTGGCCCAACCTGTTCAGACTCAGGTCAAAGGCCATGCTTCTGCTGCACAGTTTGGACAGACTGAATTCAGTGAGGAGCCTGTAAGCACTGCTAACAAATTCCAGCCTGGGTCCTGGACACCTCCAGGAAGCAAAAAATAGGTTTATTTGAAATCTCCTTTGCTGTCGTCAAGTAAATTTGCAATTTAAGTAAAATCATAGTTCTGCTGATTTTCAATGCATGTCTTGATATATATTCAGTACAGGTTTTCTTGAGACAACtgaaaagcactttatttaagTACTGGTTAGCttgctattattttttcaagtataaaggtgtatttttaaaaatgtacatttctgaaaattaaTACACTATCAGGACATCTGAGACATAGAAAAGCTCAGTAGAAAGAtgattttaacttcaaaccattgcttcctGGTAAATTACAAATCCTCTATCAATATTTTGCCCTCTTCTTGTCTAAATATGGAACCAAAATgcttctaaacaaatatgttggtcGGTTTGATGTGAGAGGATGACAGGGGATGGTCTGTTATTATAATGGATTCTagactttaaagttaaaatgatgaatgttaatttacaaacatgcagcttttcatttcacaagacaTTGATTAAAGGACCATCCAAGTCCATCCAATGTAATATAATGCTTAATTTCTCCAAACcggttctgatgaagaaacaaactggtCTACATCTGatgtttgggtgaaccattAATTTTATCATTACTGAAATGAATTGTGAAATGATGTTAAGAAATAGGTTTCTGAGAGCTCTGCTTCAGGattgtttcaaaatcaaatcaccaaatgtagaatttttttatgcattttgtttaattgaaatgttttcagaTGTCTtaccatatttaaaaaaattgaaattat

Function

GO: NA

KEGG:

id description
K18160 NDUFAF2; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU91913 lncRNA downstream 48546 8427285 ~ 8430135 (-) True G62076
XR_006251686.1 lncRNA downstream 209464 8253538 ~ 8269217 (-) True LOC122351107
XR_006251685.1 lncRNA downstream 209464 8255469 ~ 8269217 (-) False LOC122351107
XR_006251572.1 lncRNA downstream 245907 8217019 ~ 8232774 (-) False LOC122350139
TU91781 lncRNA downstream 261264 8210043 ~ 8217417 (-) True LOC122350139
TU91990 lncRNA upstream 27160 8507891 ~ 8508123 (-) True G62120
XR_006251637.1 lncRNA upstream 231306 8712037 ~ 8739931 (-) True LOC122350893
TU92069 lncRNA upstream 231492 8712223 ~ 8739953 (-) False LOC122350893
TU92070 lncRNA upstream 231492 8712223 ~ 8713432 (-) False LOC122350893
TU92189 lncRNA upstream 432751 8913482 ~ 8914004 (-) True G62239
XM_043246030.1 mRNA downstream 2134 8469042 ~ 8476547 (-) False depdc1a
XM_043246028.1 mRNA downstream 2134 8469042 ~ 8476547 (-) True depdc1a
XM_043247879.1 mRNA downstream 11468 8463209 ~ 8467213 (-) True LOC122351041
XM_043247880.1 mRNA downstream 12179 8463209 ~ 8466502 (-) False LOC122351041
XM_043247872.1 mRNA downstream 21447 8431193 ~ 8457234 (-) False osbpl9
XM_043247251.1 mRNA upstream 120264 8600995 ~ 8606166 (-) True rab3c
XM_043246677.1 mRNA upstream 166539 8647270 ~ 8649983 (-) False mrps36
XM_043246672.1 mRNA upstream 171573 8652304 ~ 8657286 (-) True pola2
XM_043246846.1 mRNA upstream 266156 8746887 ~ 8808599 (-) True skia
XM_043246733.1 mRNA upstream 339625 8820356 ~ 8911987 (-) True prkcz
XR_006251693.1 other downstream 48907 8429694 ~ 8429774 (-) True LOC122351130
XR_006251694.1 other downstream 49137 8429474 ~ 8429544 (-) True LOC122351131
XR_006251695.1 other downstream 49361 8429253 ~ 8429320 (-) True LOC122351132
XR_006251691.1 other downstream 49777 8428825 ~ 8428904 (-) True LOC122351128
XR_006251692.1 other downstream 50994 8427615 ~ 8427687 (-) True LOC122351129
TU92042 other upstream 166550 8647281 ~ 8649965 (-) False mrps36
TU92043 other upstream 166550 8647281 ~ 8649965 (-) True mrps36
XR_006251592.1 other upstream 171695 8652426 ~ 8657286 (-) False pola2
XR_006251623.1 other upstream 777221 9257952 ~ 9262826 (-) False mindy4
TU92748 other upstream 1474019 9954750 ~ 9961701 (-) False mllt1a

Expression Profile