RNA id: XR_006251691.1



Basic Information


Item Value
RNA id XR_006251691.1
length 80
RNA type snoRNA
GC content 0.34
exon number 1
gene id LOC122351128
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 8428825 ~ 8428904 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CACTGTTTATGATGATTGTTATAAAACAATGGGAATCTCTCTGAATTAGACTGAAAGACCTCTTTTGTACTGAAACAGTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006251686.1 lncRNA downstream 159608 8253538 ~ 8269217 (-) True LOC122351107
XR_006251685.1 lncRNA downstream 159608 8255469 ~ 8269217 (-) False LOC122351107
XR_006251572.1 lncRNA downstream 196051 8217019 ~ 8232774 (-) False LOC122350139
TU91781 lncRNA downstream 211408 8210043 ~ 8217417 (-) True LOC122350139
XR_006251635.1 lncRNA downstream 474183 7951561 ~ 7954642 (-) True LOC122350891
TU91990 lncRNA upstream 78987 8507891 ~ 8508123 (-) True G62120
XR_006251637.1 lncRNA upstream 283133 8712037 ~ 8739931 (-) True LOC122350893
TU92069 lncRNA upstream 283319 8712223 ~ 8739953 (-) False LOC122350893
TU92070 lncRNA upstream 283319 8712223 ~ 8713432 (-) False LOC122350893
TU92189 lncRNA upstream 484578 8913482 ~ 8914004 (-) True G62239
XM_043247881.1 mRNA downstream 2119 8422739 ~ 8426706 (-) True tor3a
XM_043247751.1 mRNA downstream 6630 8417430 ~ 8422195 (-) True calr
XM_043246729.1 mRNA downstream 12272 8392345 ~ 8416553 (-) False eps15
XM_043247873.1 mRNA upstream 2289 8431193 ~ 8457234 (-) False osbpl9
XM_043247872.1 mRNA upstream 2289 8431193 ~ 8457234 (-) False osbpl9
XM_043247871.1 mRNA upstream 2289 8431193 ~ 8457234 (-) True osbpl9
XM_043247875.1 mRNA upstream 2289 8431193 ~ 8449770 (-) False osbpl9
XM_043247874.1 mRNA upstream 2289 8431193 ~ 8447471 (-) False osbpl9
XR_006251692.1 other downstream 1138 8427615 ~ 8427687 (-) True LOC122351129
XR_006251596.1 other downstream 12272 8392345 ~ 8416553 (-) False eps15
TU91784 other downstream 211408 8117008 ~ 8217417 (-) False LOC122350139
XR_006251629.1 other downstream 741263 7678416 ~ 7687562 (-) False spata6
TU91479 other downstream 1327893 7094898 ~ 7100932 (-) False lhx4
XR_006251695.1 other upstream 349 8429253 ~ 8429320 (-) True LOC122351132
XR_006251694.1 other upstream 570 8429474 ~ 8429544 (-) True LOC122351131
XR_006251693.1 other upstream 790 8429694 ~ 8429774 (-) True LOC122351130
TU92042 other upstream 218377 8647281 ~ 8649965 (-) False mrps36
TU92043 other upstream 218377 8647281 ~ 8649965 (-) True mrps36

Expression Profile