Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_022669523.1 |
| length | 1033 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 7 |
| gene id | selenos |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035901.1 |
| NCBI id | CM008304.1 |
| chromosome length | 40584741 |
| location | 5312640 ~ 5320139 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0006886 | intracellular protein transport | biological_process |
| GO:0030176 | integral component of endoplasmic reticulum membrane | cellular_component |
| GO:0005881 | cytoplasmic microtubule | cellular_component |
| GO:0008430 | selenium binding | molecular_function |
| id | description |
|---|---|
| K14025 | SELS, VIMP; selenoprotein S |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU54663 | lncRNA | upstream | 296 | 5308546 ~ 5312344 (+) | True | snrpa1 |
| TU54609 | lncRNA | upstream | 149311 | 5133530 ~ 5163329 (+) | True | G40511 |
| TU54611 | lncRNA | upstream | 149311 | 5158991 ~ 5163329 (+) | False | G40511 |
| TU54612 | lncRNA | upstream | 149311 | 5158991 ~ 5163329 (+) | False | G40511 |
| TU54595 | lncRNA | upstream | 158116 | 5147625 ~ 5154524 (+) | True | G40510 |
| TU54674 | lncRNA | downstream | 125054 | 5445193 ~ 5458624 (+) | True | G40556 |
| TU54748 | lncRNA | downstream | 428992 | 5749131 ~ 5749712 (+) | True | G40617 |
| TU54802 | lncRNA | downstream | 520415 | 5840554 ~ 5840773 (+) | True | G40660 |
| TU54837 | lncRNA | downstream | 744259 | 6064398 ~ 6064642 (+) | True | G40692 |
| TU54840 | lncRNA | downstream | 771732 | 6091871 ~ 6092282 (+) | True | G40695 |
| XM_022669521.1 | mRNA | upstream | 1718 | 5305687 ~ 5310922 (+) | False | snrpa1 |
| XM_007258133.3 | mRNA | upstream | 306055 | 5001765 ~ 5006585 (+) | True | mex3b |
| XM_022669519.1 | mRNA | upstream | 379611 | 4762193 ~ 4933029 (+) | True | efl1 |
| XM_022669516.1 | mRNA | upstream | 568088 | 4535235 ~ 4744552 (+) | True | LOC103028701 |
| XM_022669518.1 | mRNA | upstream | 622642 | 4535234 ~ 4689998 (+) | False | LOC103028701 |
| XM_007260216.2 | mRNA | downstream | 8089 | 5328228 ~ 5424313 (+) | True | chsy1 |
| XM_022669526.1 | mRNA | downstream | 389561 | 5709700 ~ 5717935 (+) | True | lins1 |
| XM_015602437.2 | mRNA | downstream | 402737 | 5722876 ~ 5750365 (+) | False | cers3 |
| XM_022669527.1 | mRNA | downstream | 402737 | 5722876 ~ 5749918 (+) | False | cers3 |
| XM_007237231.3 | mRNA | downstream | 402750 | 5722889 ~ 5750365 (+) | False | cers3 |
| TU54660 | other | upstream | 1833 | 5308546 ~ 5310807 (+) | False | snrpa1 |
| TU54378 | other | upstream | 1177055 | 4134510 ~ 4135585 (+) | True | G40318 |
| TU53987 | other | upstream | 2501144 | 2689967 ~ 2811496 (+) | False | LOC103029230 |
| TU53995 | other | upstream | 2574423 | 2735596 ~ 2738217 (+) | False | LOC103029230 |
| TU53708 | other | upstream | 3526119 | 1783424 ~ 1786521 (+) | False | muc2 |
| TU54910 | other | downstream | 1213226 | 6533365 ~ 6533674 (+) | True | G40756 |
| XR_001518717.2 | other | downstream | 2506384 | 7826523 ~ 7826914 (+) | True | LOC107197696 |
| TU55733 | other | downstream | 4675614 | 9995753 ~ 10005398 (+) | False | LOC103037553 |
| trnar-ucg_1 | other | downstream | 4972198 | 10292337 ~ 10292409 (+) | True | trnar-ucg_1 |
| trnam-cau_21 | other | downstream | 5435070 | 10755209 ~ 10755281 (+) | True | trnam-cau_21 |
