RNA id: XM_007232714.3



Basic Information


Item Value
RNA id XM_007232714.3
length 541
RNA type mRNA
GC content 0.55
exon number 4
gene id ndufb2
representative False

Chromosome Information


Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 19600214 ~ 19605725 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


AGAGCGTGGTGCTGAAGGGCCGCTGTACAGGCTGGTATCAGAAGGTGACATTAGCAGGTTCCGGACGGGTTCGGGAGTTTAGAGTAGCGGGTAGAGAATGTCCACGATCGGGAGGACGGTGGGAATCTTCCGAGCCGGAGCTCAGGTCCTCCGCCGGGGGACCCAGCGAGTCCAGGTCCGCAGAGCGGGAGATGGTCCACACATCGAGGCCCAGTACAGACAGCCCCCACAGCTGACCAAACACCAGCAGTTCCATGCTGAGCTGCTGAGCGGAGCCATGTGGTTCTGGATCCTGTGGCACAGCTGGCATGACCCGGACGCAGTACTGGGTCATTTCCCCTGGCCGGACATGTCCGCATGGACAGACGAGGAGTTGGGAATCCCTCCTGATGATGAGTAAAAAGCTCCATGTTGTTCTGAATCCGGATTCTGATCAGAGGCTCCTCCAGACTCTCTCCAGTTCCAGACTGCTAAGAGTTAATTCTGTACAGAGACTTATTTATCAAGTCtgatttaataaagtttaattgtGTTAAAGTTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU88121 lncRNA downstream 7135 19592294 ~ 19593113 (-) True G65273
TU88118 lncRNA downstream 11790 19580127 ~ 19588458 (-) True G65271
TU88113 lncRNA downstream 25739 19510800 ~ 19574509 (-) True G65267
TU88114 lncRNA downstream 89069 19510895 ~ 19511179 (-) False G65267
TU88101 lncRNA downstream 174048 19402344 ~ 19426200 (-) True G65256
TU88127 lncRNA upstream 572 19606290 ~ 19606501 (-) True G65279
TU88124 lncRNA upstream 3736 19609454 ~ 19610489 (-) True G65276
TU88125 lncRNA upstream 5217 19610935 ~ 19611878 (-) True G65277
TU88204 lncRNA upstream 63829 19669547 ~ 19672117 (-) True G65339
TU88214 lncRNA upstream 121589 19727307 ~ 19779459 (-) False G65347
XM_022671463.1 mRNA downstream 84865 19409298 ~ 19515383 (-) True sema3c
XM_022671457.1 mRNA downstream 280831 19305987 ~ 19319417 (-) True cdr2l
XM_022671426.1 mRNA downstream 478788 19111133 ~ 19121460 (-) True LOC103035518
XM_007242359.3 mRNA downstream 881618 18717502 ~ 18718630 (-) True LOC103035404
XM_022671435.1 mRNA downstream 949950 18638307 ~ 18650298 (-) True LOC111192971
XM_007232709.3 mRNA upstream 59841 19665559 ~ 19714443 (-) True lhfpl3
XM_007232707.3 mRNA upstream 127037 19732755 ~ 19738419 (-) True guca1a
XM_015601150.2 mRNA upstream 189436 19795154 ~ 19799583 (-) True llph
XM_022671482.1 mRNA upstream 448233 20053951 ~ 20064790 (-) True acss3
XM_007232807.3 mRNA upstream 577376 20183094 ~ 20189701 (-) True myf5
TU88053 other downstream 316216 19280302 ~ 19284032 (-) True G65231
TU88002 other downstream 576590 18898185 ~ 19023658 (-) True G65184
TU88001 other downstream 680726 18898185 ~ 18919522 (-) False G65184
TU87843 other downstream 949905 18643371 ~ 18650343 (-) False LOC111192971
TU87588 other downstream 1669078 17928507 ~ 17931170 (-) True G64886
TU88246 other upstream 191961 19797679 ~ 19799602 (-) False llph
TU88823 other upstream 2024240 21629958 ~ 21684828 (-) True G65803
TU88824 other upstream 2024403 21630121 ~ 21684828 (-) False G65803
TU89155 other upstream 2684967 22290685 ~ 22291682 (-) True G66081
TU89874 other upstream 4902116 24507834 ~ 24508281 (-) True G66619

Expression Profile