Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_007235619.3 |
| length | 919 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 3 |
| gene id | rnf7 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035914.1 |
| NCBI id | CM008317.1 |
| chromosome length | 41377133 |
| location | 22722720 ~ 22727446 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0008270 | zinc ion binding | molecular_function |
| id | description |
|---|---|
| K10611 | RBX2, ROC2, RNF7; RING-box protein 2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU216991 | lncRNA | upstream | 960 | 22721208 ~ 22721760 (+) | True | G160115 |
| TU216981 | lncRNA | upstream | 49816 | 22670116 ~ 22672904 (+) | True | G160106 |
| TU216972 | lncRNA | upstream | 72654 | 22649831 ~ 22650066 (+) | True | G160098 |
| TU216970 | lncRNA | upstream | 73801 | 22648636 ~ 22648919 (+) | True | G160096 |
| XR_002651265.1 | lncRNA | upstream | 99947 | 22622346 ~ 22622773 (+) | True | LOC111194780 |
| TU217006 | lncRNA | downstream | 17911 | 22745357 ~ 22746298 (+) | True | G160129 |
| TU217025 | lncRNA | downstream | 119945 | 22847391 ~ 22847763 (+) | True | G160144 |
| TU217017 | lncRNA | downstream | 129646 | 22857092 ~ 22860616 (+) | True | G160137 |
| TU217022 | lncRNA | downstream | 167609 | 22895055 ~ 22899397 (+) | True | G160142 |
| TU217043 | lncRNA | downstream | 184113 | 22911559 ~ 22948189 (+) | True | G160160 |
| XM_007251005.3 | mRNA | upstream | 330145 | 22302354 ~ 22392575 (+) | True | LOC103028656 |
| XM_007251004.3 | mRNA | upstream | 435079 | 22282694 ~ 22287641 (+) | True | snrpa |
| XM_007251016.2 | mRNA | upstream | 462649 | 22234292 ~ 22260071 (+) | True | itpkc |
| XM_022679747.1 | mRNA | upstream | 489665 | 22205157 ~ 22233055 (+) | False | LOC103027502 |
| XM_007235620.2 | mRNA | downstream | 1087 | 22728533 ~ 22736629 (+) | True | LOC103026853 |
| XM_022679750.1 | mRNA | downstream | 86089 | 22813535 ~ 22816398 (+) | True | LOC103027133 |
| XM_007235622.2 | mRNA | downstream | 165026 | 22892472 ~ 22893301 (+) | True | LOC103027426 |
| XM_022679757.1 | mRNA | downstream | 333129 | 23060575 ~ 23094876 (+) | True | LOC103030816 |
| XM_007231092.2 | mRNA | downstream | 650423 | 23377869 ~ 23673136 (+) | True | LOC103026225 |
| XR_002651264.1 | other | upstream | 99413 | 22622839 ~ 22623307 (+) | True | LOC111194779 |
| TU216738 | other | upstream | 569935 | 22147844 ~ 22152785 (+) | True | G159926 |
| TU216515 | other | upstream | 1710926 | 21009302 ~ 21011794 (+) | True | G159748 |
| TU216494 | other | upstream | 1985671 | 20736598 ~ 20737049 (+) | True | G159728 |
| TU216418 | other | upstream | 2535801 | 20185516 ~ 20186919 (+) | True | G159666 |
| TU217011 | other | downstream | 125966 | 22853412 ~ 22854081 (+) | True | G160134 |
| TU217233 | other | downstream | 1391683 | 24119129 ~ 24119825 (+) | True | G160306 |
| TU217966 | other | downstream | 4021933 | 26749379 ~ 26755313 (+) | False | LOC103021732 |
| TU218064 | other | downstream | 4177798 | 26905244 ~ 26907627 (+) | True | G160919 |
| XR_002651269.1 | other | downstream | 4382225 | 27109671 ~ 27117211 (+) | False | ccnl1 |
