Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU250603 |
| length | 1160 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G184944 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035917.1 |
| NCBI id | CM008320.1 |
| chromosome length | 21661149 |
| location | 16494547 ~ 16541739 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU250592 | lncRNA | downstream | 30008 | 16462678 ~ 16468266 (-) | True | G184939 |
| XR_002651561.1 | lncRNA | downstream | 36087 | 16454360 ~ 16462187 (-) | False | LOC111195238 |
| TU250582 | lncRNA | downstream | 36469 | 16453885 ~ 16461805 (-) | True | LOC111195238 |
| TU250624 | lncRNA | upstream | 21300 | 16553999 ~ 16554312 (-) | True | G184957 |
| TU250625 | lncRNA | upstream | 22076 | 16554775 ~ 16554991 (-) | True | G184958 |
| TU250626 | lncRNA | upstream | 22555 | 16555254 ~ 16555678 (-) | True | G184959 |
| TU250631 | lncRNA | upstream | 29690 | 16562389 ~ 16563448 (-) | True | G184962 |
| TU250634 | lncRNA | upstream | 35849 | 16568548 ~ 16631423 (-) | True | G184964 |
| XM_015606673.2 | mRNA | downstream | 142265 | 16351574 ~ 16356009 (-) | False | mab21l2 |
| XM_022682016.1 | mRNA | downstream | 142265 | 16351574 ~ 16356009 (-) | True | mab21l2 |
| XM_007230241.2 | mRNA | downstream | 313462 | 16180070 ~ 16184812 (-) | True | rps3a |
| XM_022682018.1 | mRNA | downstream | 357004 | 16119674 ~ 16141270 (-) | True | fam160a1 |
| XM_007230236.3 | mRNA | downstream | 401954 | 16095030 ~ 16096320 (-) | True | dctpp1 |
| XM_007232723.3 | mRNA | upstream | 217953 | 16750652 ~ 16756899 (-) | True | fabp2 |
| XM_007232722.3 | mRNA | upstream | 232728 | 16765427 ~ 16798748 (-) | True | gucy1b3 |
| XM_007232721.3 | mRNA | upstream | 271878 | 16804577 ~ 16827354 (-) | True | gucy1a3 |
| XM_007232754.3 | mRNA | upstream | 338318 | 16871017 ~ 16874481 (-) | True | npy2r |
| XM_007230283.3 | mRNA | upstream | 366351 | 16899050 ~ 16901684 (-) | False | lrat |
| TU250482 | other | downstream | 826338 | 15666111 ~ 15671936 (-) | True | smim14 |
| XR_452782.3 | other | downstream | 1117066 | 15377708 ~ 15381208 (-) | False | smim18 |
| TU250431 | other | downstream | 1117830 | 15377367 ~ 15380444 (-) | False | smim18 |
| trnas-gcu_6 | other | downstream | 2406684 | 14091509 ~ 14091590 (-) | True | trnas-gcu_6 |
| trnas-gcu_5 | other | downstream | 2408487 | 14089706 ~ 14089787 (-) | True | trnas-gcu_5 |
| trnaw-cca_46 | other | upstream | 44124 | 16576823 ~ 16576895 (-) | True | trnaw-cca_46 |
| trnar-ucg_6 | other | upstream | 44226 | 16576925 ~ 16576997 (-) | True | trnar-ucg_6 |
| trnar-ccg_7 | other | upstream | 44329 | 16577028 ~ 16577100 (-) | True | trnar-ccg_7 |
| trnar-ucu_5 | other | upstream | 44431 | 16577130 ~ 16577202 (-) | True | trnar-ucu_5 |
| trnar-ucu_6 | other | upstream | 44533 | 16577232 ~ 16577303 (-) | True | trnar-ucu_6 |
