Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU250611 |
| length | 1137 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 3 |
| gene id | G184945 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035917.1 |
| NCBI id | CM008320.1 |
| chromosome length | 21661149 |
| location | 16494730 ~ 16511182 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU250592 | lncRNA | downstream | 26464 | 16462678 ~ 16468266 (-) | True | G184939 |
| XR_002651561.1 | lncRNA | downstream | 32543 | 16454360 ~ 16462187 (-) | False | LOC111195238 |
| TU250582 | lncRNA | downstream | 32925 | 16453885 ~ 16461805 (-) | True | LOC111195238 |
| TU250604 | lncRNA | upstream | 18190 | 16529372 ~ 16533773 (-) | True | G184944 |
| TU250607 | lncRNA | upstream | 19554 | 16530736 ~ 16541739 (-) | False | G184944 |
| TU250624 | lncRNA | upstream | 42817 | 16553999 ~ 16554312 (-) | True | G184957 |
| TU250625 | lncRNA | upstream | 43593 | 16554775 ~ 16554991 (-) | True | G184958 |
| TU250626 | lncRNA | upstream | 44072 | 16555254 ~ 16555678 (-) | True | G184959 |
| XM_015606673.2 | mRNA | downstream | 138721 | 16351574 ~ 16356009 (-) | False | mab21l2 |
| XM_022682016.1 | mRNA | downstream | 138721 | 16351574 ~ 16356009 (-) | True | mab21l2 |
| XM_007230241.2 | mRNA | downstream | 309918 | 16180070 ~ 16184812 (-) | True | rps3a |
| XM_022682018.1 | mRNA | downstream | 353460 | 16119674 ~ 16141270 (-) | True | fam160a1 |
| XM_007230236.3 | mRNA | downstream | 398410 | 16095030 ~ 16096320 (-) | True | dctpp1 |
| XM_007232723.3 | mRNA | upstream | 239470 | 16750652 ~ 16756899 (-) | True | fabp2 |
| XM_007232722.3 | mRNA | upstream | 254245 | 16765427 ~ 16798748 (-) | True | gucy1b3 |
| XM_007232721.3 | mRNA | upstream | 293395 | 16804577 ~ 16827354 (-) | True | gucy1a3 |
| XM_007232754.3 | mRNA | upstream | 359835 | 16871017 ~ 16874481 (-) | True | npy2r |
| XM_007230283.3 | mRNA | upstream | 387868 | 16899050 ~ 16901684 (-) | False | lrat |
| TU250482 | other | downstream | 822794 | 15666111 ~ 15671936 (-) | True | smim14 |
| XR_452782.3 | other | downstream | 1113522 | 15377708 ~ 15381208 (-) | False | smim18 |
| TU250431 | other | downstream | 1114286 | 15377367 ~ 15380444 (-) | False | smim18 |
| trnas-gcu_6 | other | downstream | 2403140 | 14091509 ~ 14091590 (-) | True | trnas-gcu_6 |
| trnas-gcu_5 | other | downstream | 2404943 | 14089706 ~ 14089787 (-) | True | trnas-gcu_5 |
| trnaw-cca_46 | other | upstream | 65641 | 16576823 ~ 16576895 (-) | True | trnaw-cca_46 |
| trnar-ucg_6 | other | upstream | 65743 | 16576925 ~ 16576997 (-) | True | trnar-ucg_6 |
| trnar-ccg_7 | other | upstream | 65846 | 16577028 ~ 16577100 (-) | True | trnar-ccg_7 |
| trnar-ucu_5 | other | upstream | 65948 | 16577130 ~ 16577202 (-) | True | trnar-ucu_5 |
| trnar-ucu_6 | other | upstream | 66050 | 16577232 ~ 16577303 (-) | True | trnar-ucu_6 |
