RNA id: XM_022681749.1


Basic Information

Item Value
RNA id XM_022681749.1
length 2845
RNA type mRNA
GC content 0.47
exon number 18
gene id melk
representative True

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 6380403 ~ 6403796 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

GTGTGACGCGTCAGTGGGAAATTCAAAATCTGCTCTGCTTGTTTCAGGGAGCTGAAGCTGGACGGGCTgagtgtgtgttaagtgtgtgttttagagtgattgtgtgtgtttaaatgtgtttgagtgtgttttagATATATTTACCAGCTTTTTTTCTCCTGAGACTCTGAGAATAAGCGGGTTTTCTCTCCTCTCGGACCGGTTTAATCACGGAGACTCGCGGCTGAAGCTGTTCGTAAACATGCCTGCAGAAAATGCCTCCGAGCTCCTCAAGTACTATGAAGTGTATGAAACCATTGGTTCAGGCGGTTTTGCTAAAGTCAAGCTGGGCAGACACATTCTGACCGGAGAGAAAGTGGCCATCAAGATCATGGAGAAGAAAGACCTGGGGgatGATCTGCCTCGTATAAAGACGGAGATCGACGCCATGAAGAACCTCAGTCATCAGCACGTGTGTCGCCTTTACCACGTCATTGAGACGTCCAGCAAGATCTACATGGTGCTGGAGTATTGTCCTGGAGGAGAGCTGTTCGATTATATCGTAGCTAAAGACCGACTGTCTGAAGAGGAAACCCGAGTGTTCTTCCGCCAGATCGTCTCGGCTCTGGCCTACGTCCACAGCCAGGGATACGCCCACCGTGACCTCAAACCAGAAAACTTACTGATTGATGAGGATCACAACTTGAAGCTGATTGACTTCGGTCTCTGTGCCAAACCAAAGGGAGGTTTGGGTTATGAACTGATGACCTGCTGTGGAAGCCCAGCCTACGCAGCTCCAGAACTCATTCAGGGAAAGTCGTATATTGGTTCTGAGgcagATGTTTGGAGTATGGGCGTGTTGCTGTTTGCTCTGCTATGTGGTTACCTCCCGTTCGACGATGATAACTGTATGGTCCTGTACAGAAAAATCACAAGGGGTCATTATGATAACCCCCGCTGGCTGTCTCCTGGCAGCGTTCTGCTGCTGAACCAGATGATGCAGGTGGAGCCAAAGAGGCGTTTATCAGTGAGACAGCTGCTGGATCACCCCTGGGTGATGAAGGATTACAGCAGCCCTGTGGAGTGGCACACTACTCGCCCGttggGTCATATAGATGAGGACTGCATCACTGAGATGGCTGTGGCGTTGAAGCGCTCCAAAAAGAGCACCATCCAGCTGGTATCAGAGtggaaGTACGACCAGACCACAGCTACATATCTGTTACTACTGGCCAAGAAGCAGCGTGGAAAGCCGGTGCGACTCAGAGTGGAGATGccaacccaagaccccagctgCTGTTCTCTTCAAGATATACAATTGAAGACCCTGCATTttaatgatgatgaagatgagtATGTGGAGGATGGTGCGCACCGGGGCTCCATGATCTTTCCTGCTGATTGCTATGACGATGATAATGCTTGGATCCCCCTAGTGTCCAAAAACACACAAGCCACCTACACTCCGAGCAAGAAACCCTCCTGTCAGTCGTCTGAAAATAGACGGGCTGATGTAGGCCAGTCCCCCATCATCAACCAAGGGAAGCCACACCCACGCAACAGCGAGAAACGTGAACGCACCAGAGAAAACAAAGAGAACCTGTCCGCTCCGAGTCGAGACGGCAGCGGATTTGCCCTCCCTGCTCCTGTTACTCCAGTGGTGGGACGGAGGGGACGGTCGAACAAAATGGCACAAACCACGcccatcaacaacaacaacgtCATAAACATGACGGAAACTCCGAAAGaatCTTCCCGCCGGAGGGCAGTGGAGCAGCAGTCTCAGCAGAGTGGTCAGCAGGGAGGACTAGAGATCCTGGCCTTCAGTCCAGAGAGACGGTCCCGCTCTCTGGACATGGCGGGTTGCCAGGTTGACAGCGGGCAGAAGCGTAAAGCAGGGAAAGTGTTCGGCAGTCTGGAGAGAGGCCTGGATAAAGTCATCACCATGCTGACCCCCAACAAGAAGAGAGGTCTAAGAGACGGCCCCCGCAGGATAAAGGCGCAGTATAACGTGACTCTGACGAGTCAGACCAGTGCAGACCAGGTGCTGAACCAGATTCTCAGAGTTCTACCAGAGAAGAATGTGGACTTTGTGCAGAAAGGgtacACTCTGAAGTGTCGTACGCAGTCAGATTTCGGGAAGGTGACGATGCAGTTTGAGCTGGAGGTCTGTTTGCTGCAGAAGCCGAAGGTGGTGGGCGTCCGGCGGCAGAGGCTGAAGGGAGACGCCTGGGTGTATAAACACCTGGTGGAGGACATCCTGTCCAACAGCAGAATCTGACCTCACCTGCTCCGTCCCTCTCACTGCTCTCAGCTCACCATGAATCCTGGGTTTCAGTCCTTGTCCATCAAGGTCTATCAGTGTAGATCGTTTTACATCCTGTAGAAGTTTAATGGAAATGAtaatggtattattattattattattattattattattatttcctattTATATACAGATTTCAATTGTGCACTTTTACTATTCTAATTGCTATTAGCGTTTCCAGTTATTGTAAGTAATGTAAGTATATCACAACGCAAgacctttttaaaatatgtttactactttttttttatggcagcattttaaagcattaaccTGAATccatttgtttgtctttttttctctgtgtttttctgtgttgtttaaaaaaGTCTTGTGTTGTTTCTTTACCTCAcagtcttaaaaaaataaagtgctttgaatagttttcttttaaaggaagccatgtaaaaaaaaaaaacattttcagtacAATAAAGACCATGTTTGTTATATAGTGTTATTAATTTTTATGGTCTGCAGAACCTTTACTGCGtgtaaaagttgtttttcaCCAGATTAAAAGATTCTTCACGCCTAAAA

Function

GO:

id name namespace
GO:0018108 peptidyl-tyrosine phosphorylation biological_process
GO:0048821 erythrocyte development biological_process
GO:0043065 positive regulation of apoptotic process biological_process
GO:0007049 cell cycle biological_process
GO:0008016 regulation of heart contraction biological_process
GO:0046777 protein autophosphorylation biological_process
GO:0061351 neural precursor cell proliferation biological_process
GO:0005886 plasma membrane cellular_component
GO:0005938 cell cortex cellular_component
GO:0005509 calcium ion binding molecular_function
GO:0005524 ATP binding molecular_function
GO:0008289 lipid binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0004715 non-membrane spanning protein tyrosine kinase activity molecular_function

KEGG:

id description
K08799 MELK; maternal embryonic leucine zipper kinase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU248015 lncRNA downstream 13230 6356281 ~ 6367173 (-) True G183121
TU247894 lncRNA downstream 180214 6199682 ~ 6200189 (-) True G183058
TU247835 lncRNA downstream 417053 5962458 ~ 5963350 (-) True G183016
TU247755 lncRNA downstream 544840 5834991 ~ 5835563 (-) True G182956
TU247748 lncRNA downstream 665284 5714694 ~ 5715119 (-) True G182951
TU248018 lncRNA upstream 1928 6405724 ~ 6408023 (-) False tmsb10
TU248034 lncRNA upstream 71194 6474990 ~ 6552368 (-) False G183134
TU248030 lncRNA upstream 102631 6506427 ~ 6535456 (-) False G183134
TU248031 lncRNA upstream 102631 6506427 ~ 6666542 (-) True G183134
TU248033 lncRNA upstream 102631 6506427 ~ 6551560 (-) False G183134
XM_022681743.1 mRNA downstream 143292 6150690 ~ 6237111 (-) True zcchc7
XM_022682137.1 mRNA downstream 240050 6127155 ~ 6140353 (-) True LOC103028109
XM_022681733.1 mRNA downstream 279960 6052735 ~ 6100443 (-) True frmpd1
XM_022681732.1 mRNA downstream 331913 6030710 ~ 6048490 (-) True pgm2
XM_022681731.1 mRNA downstream 379530 5928738 ~ 6000873 (-) False tbc1d1
XM_007242968.3 mRNA upstream 2401 6406197 ~ 6408021 (-) False tmsb10
XM_022681755.1 mRNA upstream 18715 6422511 ~ 6426583 (-) False LOC111195197
XM_022682140.1 mRNA upstream 731979 7135775 ~ 7149290 (-) True LOC111195268
XM_022682142.1 mRNA upstream 760642 7164438 ~ 7168366 (-) True LOC111195269
XM_022681771.1 mRNA upstream 777082 7180878 ~ 7188349 (-) False LOC111195200
TU247875 other downstream 267311 6111370 ~ 6113092 (-) True G183043
TU247634 other downstream 1084687 5285988 ~ 5295716 (-) False LOC111195184
TU247548 other downstream 1167252 5180523 ~ 5213151 (-) False G182810
TU247085 other downstream 2829990 3547633 ~ 3550413 (-) True G182501
XR_002651509.1 other downstream 2925817 3442566 ~ 3454586 (-) True LOC103039001
TU248021 other upstream 18307 6422103 ~ 6426508 (-) True LOC111195197
TU248263 other upstream 1086710 7490506 ~ 7502072 (-) False LOC111195271
TU248668 other upstream 3251517 9655313 ~ 9657614 (-) True G183559
TU248707 other upstream 3442026 9845822 ~ 9852381 (-) False G183585
TU249167 other upstream 4902493 11306289 ~ 11306821 (-) True G183880

Expression Profile