RNA id: XM_022682114.1


Basic Information

Item Value
RNA id XM_022682114.1
length 1469
RNA type mRNA
GC content 0.49
exon number 10
gene id arhgap19
representative True

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 20932530 ~ 20940432 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

ATGTTTTTACGGAGCTTCTGCTGAGTAACGTGACCCGGCTGATGGACCTGCCCGGCGCCGAGTTCTCCCAGCTGCAGGGCGAGTCCGAACTCAAGCTTCCCCCCTCCACCGGCTTCCTGCGCCTCCCCAACTTCCTCAAACGCAAAGagaaAGGAGTGGTTTTTGGAGCACCTTTAACTGAGGAGGGCATCGCACAAATCTACCAGCTAATAGAGTACCTGGGTAAAAACCTGCATGTGGAGGGGCTGTTCCGAGTTCCCGGGAACAGCATCAGACAGCAGGCCCTGCGGGAGATGCTGAACGCCGGGGCCGATATAGACCTGGAGACGGGGGACTACCACCCCCACGACGTGGCCACGCTCCTCAAGACCTTCCTCGGGGAGCTGCCGGAGCCGCTGCTGACTCACCGCCATTACCACGCTCACCTCAAAATAGCcgagaTGACTCTGTTTGATGAAAAAGGCAATAAAACGTCTGTTCCTCATAAAGAGCGTCAGATTGAAGCCCTGCAGCTTCTCTTCATGCTGCTTCCTTCAGCCAATCGCAGCCTCCTGAAACTCCTGCTGGACCTTCTGTACCAAACCGCCAAGAAACAGGACAAAAACAAGATGTCCGCCCACAACCTGGCCATCATGTTCGCTCCCCACATCATATGGCCCAAAAATGTCACAGCCAGCGATCTGCAGGATAATCTGCATAAACTCAACAGCGGAATTTCATTTCTCATCAAACACTCGCAGAAATTATTTCGGGCGCCGTCGTACATCAAAGATCACGCACGGATGCTCTTCACCGGATCCAGAACTCCTCAGTCCAAGGACGATATGGAGCTGTGCTCCGGGACGGTCAGCAGGACACGCCTCCCCTCGAAGAGAAGCAGTGATGAGCACGACGGTGgaggacagcagcagcagcatcacacTCAGGATGCTCTCCGTGATCTCTTCAACCACGTCACCAACATGCCCGAATCCGCCAAGAAGAAGAAGCTCATTCGACAGttcaacAAGCAGGGAACTCCTGTTCGGGAAAACACCAGACCTCCTTCAAATACCAAACACGGGCGCTCTCGGTCTTTAGGAGGACTTATAAAGAAGAAAGTTTTGGGGAGTCAGCTCACAGTAACGGGAACGTCTCAAACCAAAGAGGCGACAAAAGGAAGCAGCGCCTCGTCTATCAAACGGACCCCCCTCTCTCCGGCCCAGCAGTCCAGTTTAAGCTTAccttaactatttatttaacctttaatcCATTTAGATCAGatagataataatataattggctaataatataatttacagtCCGATAACAAAGTCGAGCCAGTGTGATTTTAACCCGaaccattaaaatgtttaattttagtgAAGATTTCTACAGGATTTTAAGTTATAAAAATGTCTGTTGCACCCTGAACaaagcattaattaaaaaaaggtattaaaagaaaaaaaataaaatataaaaaggta

Function

GO:

id name namespace
GO:0007165 signal transduction biological_process
GO:0005622 intracellular anatomical structure cellular_component

KEGG:

id description
K20640 ARHGAP19; Rho GTPase-activating protein 19

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU252069 lncRNA downstream 5890 20919092 ~ 20926640 (-) True G185976
TU252070 lncRNA downstream 106119 20764151 ~ 20826411 (-) False LOC103038058
TU252094 lncRNA downstream 180257 20751201 ~ 20752273 (-) False G185990
TU252089 lncRNA downstream 187857 20741649 ~ 20744673 (-) True G185989
TU252086 lncRNA downstream 192656 20738882 ~ 20739874 (-) True G185986
TU252147 lncRNA upstream 165635 21106067 ~ 21106285 (-) True G186026
TU252141 lncRNA upstream 173730 21114162 ~ 21118432 (-) True G186022
TU252142 lncRNA upstream 173730 21114162 ~ 21116832 (-) False G186022
TU252143 lncRNA upstream 173730 21114162 ~ 21118432 (-) False G186022
TU252152 lncRNA upstream 185787 21126219 ~ 21130177 (-) True G186031
XM_022682113.1 mRNA downstream 15906 20764128 ~ 20916624 (-) True LOC103038058
XM_007253166.3 mRNA downstream 173801 20753938 ~ 20758729 (-) True LOC103027406
XM_022682110.1 mRNA downstream 213849 20709836 ~ 20718681 (-) True LOC107197722
XM_022682108.1 mRNA downstream 224880 20691929 ~ 20707650 (-) False LOC103038689
XM_022682109.1 mRNA downstream 224899 20691929 ~ 20707631 (-) True LOC103038689
XM_022682115.1 mRNA upstream 96449 21036881 ~ 21052668 (-) True LOC111195255
XM_022682118.1 mRNA upstream 118752 21059184 ~ 21108034 (-) False LOC103026251
XM_022682116.1 mRNA upstream 118752 21059184 ~ 21108034 (-) False LOC103026251
XM_022682117.1 mRNA upstream 118752 21059184 ~ 21103485 (-) True LOC103026251
XM_022682122.1 mRNA upstream 196330 21136762 ~ 21273827 (-) True kcnip2
TU252090 other downstream 180257 20748164 ~ 20752273 (-) True G185990
TU252091 other downstream 180257 20748164 ~ 20752273 (-) False G185990
TU252092 other downstream 180257 20748164 ~ 20752273 (-) False G185990
TU252095 other downstream 180257 20748164 ~ 20752273 (-) False G185990
TU252059 other downstream 253936 20650168 ~ 20678594 (-) False LOC103028253

Expression Profile