RNA id: trnar-ucg_11


Basic Information

Item Value
RNA id trnar-ucg_11
length 73
RNA type tRNA
GC content 0.60
exon number 1
gene id trnar-ucg_11
representative True

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 16579497 ~ 16579569 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

ggctccatagctcagtggACAGAGCGCTGGTCTTCGAAACCAGAGGTCGCGAGTTCGATCCTCGCTGGAGTCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU250631 lncRNA downstream 16049 16562389 ~ 16563448 (-) True G184962
TU250626 lncRNA downstream 23819 16555254 ~ 16555678 (-) True G184959
TU250625 lncRNA downstream 24506 16554775 ~ 16554991 (-) True G184958
TU250624 lncRNA downstream 25185 16553999 ~ 16554312 (-) True G184957
TU250607 lncRNA downstream 37758 16530736 ~ 16541739 (-) False G184944
TU250647 lncRNA upstream 8497 16588066 ~ 16588710 (-) False G184975
TU250648 lncRNA upstream 8497 16588066 ~ 16596250 (-) False G184975
TU250649 lncRNA upstream 8497 16588066 ~ 16595752 (-) True G184975
TU250650 lncRNA upstream 8497 16588066 ~ 16595752 (-) False G184975
TU250651 lncRNA upstream 8497 16588066 ~ 16596250 (-) False G184975
XM_015606673.2 mRNA downstream 223488 16351574 ~ 16356009 (-) False mab21l2
XM_022682016.1 mRNA downstream 223488 16351574 ~ 16356009 (-) True mab21l2
XM_007230241.2 mRNA downstream 394685 16180070 ~ 16184812 (-) True rps3a
XM_022682018.1 mRNA downstream 438227 16119674 ~ 16141270 (-) True fam160a1
XM_007230236.3 mRNA downstream 483177 16095030 ~ 16096320 (-) True dctpp1
XM_007232723.3 mRNA upstream 171083 16750652 ~ 16756899 (-) True fabp2
XM_007232722.3 mRNA upstream 185858 16765427 ~ 16798748 (-) True gucy1b3
XM_007232721.3 mRNA upstream 225008 16804577 ~ 16827354 (-) True gucy1a3
XM_007232754.3 mRNA upstream 291448 16871017 ~ 16874481 (-) True npy2r
XM_007230283.3 mRNA upstream 319481 16899050 ~ 16901684 (-) False lrat
trnar-ucu_8 other downstream 30 16579395 ~ 16579467 (-) True trnar-ucu_8
trnar-ccg_15 other downstream 133 16579292 ~ 16579364 (-) True trnar-ccg_15
trnar-ccg_14 other downstream 236 16579187 ~ 16579261 (-) True trnar-ccg_14
trnar-ucg_10 other downstream 445 16578980 ~ 16579052 (-) True trnar-ucg_10
trnar-acg_14 other downstream 547 16578877 ~ 16578950 (-) True trnar-acg_14
trnar-acg_15 other upstream 31 16579600 ~ 16579672 (-) True trnar-acg_15
trnar-ucg_12 other upstream 134 16579703 ~ 16579775 (-) True trnar-ucg_12
trnar-ccg_16 other upstream 58842 16638411 ~ 16638483 (-) True trnar-ccg_16
trnar-ucu_9 other upstream 58976 16638545 ~ 16638617 (-) True trnar-ucu_9
trnaq-cug_13 other upstream 59422 16638991 ~ 16639063 (-) True trnaq-cug_13