RNA id: TU446046



Basic Information


Item Value
RNA id TU446046
length 602
RNA type TUCP
GC content 0.49
exon number 8
gene id nms
representative True

Chromosome Information


Item Value
chromosome id NW_019172900.1
NCBI id APWO02000129.1
chromosome length 294554
location 174974 ~ 179325 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


CCGTGCATTTTTATGAGGGTGAGTGCGTGGGTTCCGGGCGCGCGCCGCTCTGAGGAGAGATGAGCTTCAGCGTGGCTCAGGTGAACATCCTCTACCTGCTGCTCTGCGGCTTCTGCGGGGCTCGCGACACCGCCGAAAGTTATCCATTGACAGACTGTGAAGATGATGGAGATTATATGCAGGGTTCTGCTGTACAGAGCACTTTGTGTGGACTTGTGTGGCAAGACCAGAACAAGGAGCAGATCCAGAATGTTTTCAAACGgTTTTTGTTTCATTACTCCAAGGCACAGAACTCAGTCGGCTCAGTCGAAAGAGAGTCTCACTCTGTCCACCCACTGATGCGCCTGTCCCCGAAGTTCGTCCAGCGCAGGAGGAAACAGCATGTGTCCTCAAGAAGCTGAAGTCATGTGGCCGTTCCAATAGACTAGTTCGGGATGTGCTCTGCTCTTTAATTGGATGCTCAGGGCAGCTGTAACACCTGGAGTCGGACAGACTGACCGGAATGAtctgatgttttaaatgttttggacTGAATTTCTCACtcaattctgtaaataaatataatatcatGTAAGAGAGTCGTGTGTCTGATATTAGATTTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU446039 lncRNA downstream 10399 163909 ~ 164575 (-) True G323909
TU446036 lncRNA downstream 27400 140332 ~ 147574 (-) True G323906
TU446031 lncRNA downstream 35600 136000 ~ 139374 (-) False G323904
TU446029 lncRNA downstream 35600 136873 ~ 139374 (-) False G323904
TU446033 lncRNA downstream 35600 136873 ~ 139374 (-) True G323904
TU446054 lncRNA upstream 16076 195401 ~ 210415 (-) True G323917
XM_022667279.1 mRNA downstream 7538 141909 ~ 167436 (-) True tbc1d8
XM_007235500.3 mRNA downstream 39947 128837 ~ 135027 (-) True cnot11
XM_022667275.1 mRNA downstream 62937 103958 ~ 112037 (-) True lrrc63
XM_022667277.1 mRNA downstream 63779 103958 ~ 111195 (-) False lrrc63
XM_022667276.1 mRNA downstream 63815 103958 ~ 111159 (-) False lrrc63
XM_022667267.1 mRNA upstream 38028 217353 ~ 271612 (-) True edar
trnal-caa_87 other downstream 39523 135342 ~ 135451 (-) True trnal-caa_87
XR_002649601.1 other downstream 62938 104213 ~ 112036 (-) False lrrc63

Expression Profile