RNA id: TU70803



Basic Information


Item Value
RNA id TU70803
length 351
RNA type TUCP
GC content 0.58
exon number 2
gene id G52503
representative True

Chromosome Information


Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 16226236 ~ 16227174 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


AGCTCCGCTCTGCTCATTTCGTCTGAGCTGGTTATTAATTTTGACGATGTCCGCTAGCTTGTGCGTCAAGTCATCCTGGTTTCTAGCAGAGCCCTGCATGACCACAGCAGGTCGGACAGCGAGGGGGGGCACAGGCAGCACAGTGACGATCATCCACTCCGGCCGAGCGTATTTGGGGTCCATGCCCAGGATGAGGTCCTCCTCGTCAGAGATGCGTTTGAAAATCTCGTGGACGCGTTCGGGGCTGAGGAGGATCTTCTTCTCCTGGGAATCTTCATTAACGTGCTTCCACTCGGCGTACAGCTCCAGACCAGAGCGCCGGATACGAGGCTGGTACCGCCCACAGCCACC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU70781 lncRNA downstream 6389 16216169 ~ 16219847 (-) False LOC103028883
TU70776 lncRNA downstream 10811 16161640 ~ 16215425 (-) False LOC103028883
TU70796 lncRNA downstream 25524 16200209 ~ 16200712 (-) True G52496
TU70794 lncRNA downstream 35589 16188251 ~ 16190647 (-) True G52494
TU70792 lncRNA downstream 46234 16179519 ~ 16180002 (-) True G52492
TU70812 lncRNA upstream 9035 16236209 ~ 16238086 (-) True G52507
TU70807 lncRNA upstream 12900 16240074 ~ 16240632 (-) True G52506
TU70815 lncRNA upstream 22833 16250007 ~ 16250234 (-) True G52510
TU70855 lncRNA upstream 27968 16255142 ~ 16255478 (-) True G52542
TU70856 lncRNA upstream 33944 16261118 ~ 16289545 (-) True G52543
XM_007230746.3 mRNA downstream 35203 16163565 ~ 16191033 (-) True LOC103028883
XM_022670285.1 mRNA downstream 66520 16140670 ~ 16159716 (-) False shbg
XM_022670284.1 mRNA downstream 66527 16140670 ~ 16159709 (-) True shbg
XM_022670286.1 mRNA downstream 66527 16141692 ~ 16159709 (-) False shbg
XM_022670283.1 mRNA downstream 96860 16086166 ~ 16129376 (-) False neurl4
XM_022670951.1 mRNA upstream 123765 16350939 ~ 16356960 (-) True LOC111192725
XM_022670290.1 mRNA upstream 136439 16363613 ~ 16374341 (-) True LOC103032046
XM_022670292.1 mRNA upstream 179545 16406719 ~ 16427613 (-) True zcchc4
XM_022670300.1 mRNA upstream 595073 16822247 ~ 16928239 (-) False LOC103024300
XM_022670299.1 mRNA upstream 595073 16822247 ~ 16928239 (-) True LOC103024300
TU70793 other downstream 40924 16182735 ~ 16185312 (-) True G52493
TU70552 other downstream 1141668 15076296 ~ 15084568 (-) True G52299
TU70366 other downstream 1814625 14408936 ~ 14411611 (-) True G52161
TU70092 other downstream 2562122 13663401 ~ 13664114 (-) True G51960
TU70078 other downstream 2635393 13565998 ~ 13590843 (-) True LOC111192615
XR_002650036.1 other upstream 179545 16406719 ~ 16427613 (-) False zcchc4
TU70997 other upstream 360976 16588150 ~ 16589783 (-) True G52652
TU70998 other upstream 360976 16588150 ~ 16589783 (-) False G52652
TU71687 other upstream 2359227 18586401 ~ 18667287 (-) True G53164
TU71983 other upstream 3622776 19849950 ~ 19850350 (-) True G53382

Expression Profile