Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_022670341.1 |
| length | 852 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 3 |
| gene id | LOC103044634 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035902.1 |
| NCBI id | CM008305.1 |
| chromosome length | 52532229 |
| location | 20344023 ~ 20463885 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0005746 | mitochondrial respirasome | cellular_component |
| GO:0009055 | electron transfer activity | molecular_function |
| GO:0004129 | cytochrome-c oxidase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU72056 | lncRNA | upstream | 59000 | 20341999 ~ 20360160 (+) | False | G53431 |
| TU72055 | lncRNA | upstream | 66239 | 20341999 ~ 20352921 (+) | True | G53431 |
| TU72066 | lncRNA | upstream | 73097 | 20345482 ~ 20346063 (+) | True | G53437 |
| TU72059 | lncRNA | upstream | 80654 | 20337834 ~ 20338506 (+) | True | G53433 |
| TU72039 | lncRNA | upstream | 104511 | 20314293 ~ 20314649 (+) | True | G53422 |
| TU72166 | lncRNA | downstream | 133855 | 20557982 ~ 20560834 (+) | True | cript |
| TU72172 | lncRNA | downstream | 138184 | 20562311 ~ 20563241 (+) | True | G53531 |
| TU72233 | lncRNA | downstream | 331595 | 20755722 ~ 20755941 (+) | True | G53572 |
| TU72251 | lncRNA | downstream | 382782 | 20806909 ~ 20825661 (+) | False | fbxo11 |
| TU72254 | lncRNA | downstream | 416740 | 20840867 ~ 20841695 (+) | True | G53586 |
| XM_007230979.3 | mRNA | upstream | 11398 | 20394713 ~ 20407762 (+) | True | LOC103045569 |
| XM_007230980.2 | mRNA | upstream | 107270 | 20304705 ~ 20311890 (+) | True | LOC103045864 |
| XM_022670336.1 | mRNA | upstream | 178747 | 20230737 ~ 20240413 (+) | True | LOC111192627 |
| XM_007235652.3 | mRNA | upstream | 265303 | 20146066 ~ 20153857 (+) | False | LOC103036204 |
| XM_007235651.3 | mRNA | upstream | 265303 | 20146068 ~ 20153857 (+) | True | LOC103036204 |
| XM_022670342.1 | mRNA | downstream | 69042 | 20493169 ~ 20543537 (+) | True | rhoq |
| XM_022670898.1 | mRNA | downstream | 131187 | 20555314 ~ 20560948 (+) | False | cript |
| XM_007230970.3 | mRNA | downstream | 187844 | 20611971 ~ 20630285 (+) | True | LOC103042909 |
| XM_007230969.3 | mRNA | downstream | 257679 | 20681806 ~ 20690420 (+) | True | calm2 |
| XM_022670953.1 | mRNA | downstream | 344278 | 20768405 ~ 20774298 (+) | True | LOC103041876 |
| TU72045 | other | upstream | 130151 | 20243150 ~ 20289009 (+) | True | G53426 |
| TU71833 | other | upstream | 897374 | 19516443 ~ 19521786 (+) | True | LOC103024302 |
| TU71831 | other | upstream | 897467 | 19516443 ~ 19521693 (+) | False | LOC103024302 |
| TU71832 | other | upstream | 897467 | 19516443 ~ 19521693 (+) | False | LOC103024302 |
| TU71078 | other | upstream | 3370842 | 17032972 ~ 17048318 (+) | True | G52717 |
| TU72167 | other | downstream | 133757 | 20557884 ~ 20560834 (+) | False | cript |
| XR_454832.3 | other | downstream | 369898 | 20794025 ~ 20825674 (+) | False | fbxo11 |
| TU72536 | other | downstream | 1495098 | 21919225 ~ 21921594 (+) | True | G53804 |
| TU73348 | other | downstream | 5121865 | 25545992 ~ 25549470 (+) | False | srp19 |
| trnaw-cca_1 | other | downstream | 5140534 | 25564661 ~ 25564732 (+) | True | trnaw-cca_1 |
