Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU72844 |
| length | 311 |
| lncRNA type | inter_gene |
| GC content | 0.58 |
| exon number | 1 |
| gene id | G54027 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035902.1 |
| NCBI id | CM008305.1 |
| chromosome length | 52532229 |
| location | 23322689 ~ 23322999 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU72838 | lncRNA | downstream | 45436 | 23276834 ~ 23277253 (-) | True | G54021 |
| XR_002650047.1 | lncRNA | downstream | 67118 | 23063904 ~ 23255571 (-) | False | LOC111192637 |
| XR_002650046.1 | lncRNA | downstream | 67118 | 23063904 ~ 23255571 (-) | True | LOC111192637 |
| XR_002650045.1 | lncRNA | downstream | 67900 | 23063904 ~ 23254789 (-) | False | LOC111192637 |
| TU72812 | lncRNA | downstream | 194575 | 23127714 ~ 23128114 (-) | True | G53999 |
| TU72845 | lncRNA | upstream | 59723 | 23382722 ~ 23383118 (-) | True | G54028 |
| TU72846 | lncRNA | upstream | 73814 | 23396813 ~ 23397047 (-) | True | G54029 |
| TU72848 | lncRNA | upstream | 111024 | 23434023 ~ 23434272 (-) | True | G54031 |
| TU72849 | lncRNA | upstream | 118451 | 23441450 ~ 23443066 (-) | True | G54032 |
| TU72858 | lncRNA | upstream | 205136 | 23528135 ~ 23528974 (-) | False | G54041 |
| XM_007250130.3 | mRNA | downstream | 1257686 | 22056973 ~ 22065003 (-) | True | LOC103023701 |
| XM_007250129.3 | mRNA | downstream | 1268601 | 22046496 ~ 22054088 (-) | True | LOC103023380 |
| XM_022670358.1 | mRNA | downstream | 1268786 | 22046496 ~ 22053903 (-) | False | LOC103023380 |
| XM_007250124.3 | mRNA | downstream | 1384241 | 21933269 ~ 21938448 (-) | True | anapc16 |
| XM_007250125.3 | mRNA | downstream | 1401072 | 21919529 ~ 21921617 (-) | True | ddit4 |
| XM_022670368.1 | mRNA | upstream | 1171316 | 24494315 ~ 24607305 (-) | True | zeb1 |
| XM_022670382.1 | mRNA | upstream | 1463252 | 24786251 ~ 24920590 (-) | False | svil |
| XM_022670372.1 | mRNA | upstream | 1463252 | 24786251 ~ 24902417 (-) | False | svil |
| XM_022670376.1 | mRNA | upstream | 1463252 | 24786251 ~ 24878021 (-) | False | svil |
| XM_022670375.1 | mRNA | upstream | 1463252 | 24786251 ~ 24878021 (-) | False | svil |
| TU72809 | other | downstream | 230714 | 23091306 ~ 23091975 (-) | True | G53996 |
| XR_002650112.1 | other | downstream | 475352 | 22846676 ~ 22847337 (-) | True | LOC111192727 |
| TU72277 | other | downstream | 2503280 | 20817839 ~ 20819409 (-) | True | G53607 |
| TU72268 | other | downstream | 2535071 | 20783738 ~ 20787618 (-) | True | G53598 |
| TU72221 | other | downstream | 2632267 | 20681811 ~ 20690422 (-) | True | G53562 |
| TU73059 | other | upstream | 1018401 | 24341400 ~ 24351936 (-) | True | G54205 |
| XR_002650051.1 | other | upstream | 1464195 | 24787194 ~ 24878022 (-) | False | svil |
| trnak-uuu | other | upstream | 2243275 | 25566274 ~ 25566346 (-) | True | trnak-uuu |
| trnak-uuu_1 | other | upstream | 2244142 | 25567141 ~ 25567213 (-) | True | trnak-uuu_1 |
| trnak-uuu_2 | other | upstream | 2244394 | 25567393 ~ 25567465 (-) | True | trnak-uuu_2 |
