Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU72872 |
| length | 227 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G54053 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035902.1 |
| NCBI id | CM008305.1 |
| chromosome length | 52532229 |
| location | 23557500 ~ 23562932 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU72865 | lncRNA | downstream | 20442 | 23536824 ~ 23537058 (-) | True | G54047 |
| TU72860 | lncRNA | downstream | 23478 | 23533671 ~ 23534022 (-) | True | G54042 |
| TU72858 | lncRNA | downstream | 28526 | 23528135 ~ 23528974 (-) | False | G54041 |
| TU72859 | lncRNA | downstream | 28526 | 23528135 ~ 23528974 (-) | True | G54041 |
| TU72849 | lncRNA | downstream | 114434 | 23441450 ~ 23443066 (-) | True | G54032 |
| TU72949 | lncRNA | upstream | 591671 | 24154603 ~ 24158935 (-) | True | G54124 |
| TU73035 | lncRNA | upstream | 710059 | 24272991 ~ 24290777 (-) | True | G54188 |
| TU73054 | lncRNA | upstream | 768676 | 24331608 ~ 24332070 (-) | True | G54202 |
| TU73056 | lncRNA | upstream | 777079 | 24340011 ~ 24340825 (-) | True | G54204 |
| TU73057 | lncRNA | upstream | 782194 | 24345126 ~ 24351936 (-) | False | G54205 |
| XM_007250130.3 | mRNA | downstream | 1492497 | 22056973 ~ 22065003 (-) | True | LOC103023701 |
| XM_007250129.3 | mRNA | downstream | 1503412 | 22046496 ~ 22054088 (-) | True | LOC103023380 |
| XM_022670358.1 | mRNA | downstream | 1503597 | 22046496 ~ 22053903 (-) | False | LOC103023380 |
| XM_007250124.3 | mRNA | downstream | 1619052 | 21933269 ~ 21938448 (-) | True | anapc16 |
| XM_007250125.3 | mRNA | downstream | 1635883 | 21919529 ~ 21921617 (-) | True | ddit4 |
| XM_022670368.1 | mRNA | upstream | 931383 | 24494315 ~ 24607305 (-) | True | zeb1 |
| XM_022670382.1 | mRNA | upstream | 1223319 | 24786251 ~ 24920590 (-) | False | svil |
| XM_022670372.1 | mRNA | upstream | 1223319 | 24786251 ~ 24902417 (-) | False | svil |
| XM_022670376.1 | mRNA | upstream | 1223319 | 24786251 ~ 24878021 (-) | False | svil |
| XM_022670375.1 | mRNA | upstream | 1223319 | 24786251 ~ 24878021 (-) | False | svil |
| TU72809 | other | downstream | 465525 | 23091306 ~ 23091975 (-) | True | G53996 |
| XR_002650112.1 | other | downstream | 710163 | 22846676 ~ 22847337 (-) | True | LOC111192727 |
| TU72277 | other | downstream | 2738091 | 20817839 ~ 20819409 (-) | True | G53607 |
| TU72268 | other | downstream | 2769882 | 20783738 ~ 20787618 (-) | True | G53598 |
| TU72221 | other | downstream | 2867078 | 20681811 ~ 20690422 (-) | True | G53562 |
| TU73059 | other | upstream | 778468 | 24341400 ~ 24351936 (-) | True | G54205 |
| XR_002650051.1 | other | upstream | 1224262 | 24787194 ~ 24878022 (-) | False | svil |
| trnak-uuu | other | upstream | 2003342 | 25566274 ~ 25566346 (-) | True | trnak-uuu |
| trnak-uuu_1 | other | upstream | 2004209 | 25567141 ~ 25567213 (-) | True | trnak-uuu_1 |
| trnak-uuu_2 | other | upstream | 2004461 | 25567393 ~ 25567465 (-) | True | trnak-uuu_2 |
