RNA id: TU73579



Basic Information


Item Value
RNA id TU73579
length 210
lncRNA type intronic
GC content 0.43
exon number 2
gene id G54574
representative True

Chromosome Information


Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 26139316 ~ 26177147 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


atacaggggttggacaatgaaactgaaacacaataatttattgtggtgatggacagttctggtggaaacaggagagttgaggtgcacattgaattctgccatgatttgatcagccgtggttttatgttttttggatacaatccgggttagcacccgaacatccctttcagacagcttcctcttacagcatccacagttaatcctgttgga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU73574 lncRNA downstream 116212 26022850 ~ 26023104 (-) True G54572
TU73505 lncRNA downstream 144643 25939702 ~ 25994673 (-) True G54524
TU73475 lncRNA downstream 384256 25754722 ~ 25755060 (-) True G54498
TU73467 lncRNA downstream 410715 25728383 ~ 25728601 (-) True G54490
TU73463 lncRNA downstream 444321 25649454 ~ 25694995 (-) True G54486
TU73585 lncRNA upstream 137445 26314592 ~ 26320493 (-) True G54580
TU73597 lncRNA upstream 368925 26546072 ~ 26551536 (-) True G54592
TU73609 lncRNA upstream 396253 26573400 ~ 26576425 (-) False ccl28
TU73630 lncRNA upstream 494761 26671908 ~ 26676623 (-) True G54613
TU73640 lncRNA upstream 523449 26700596 ~ 26701882 (-) True G54623
XM_007254052.3 mRNA downstream 173251 25780429 ~ 25966065 (-) True efna5
XM_015607074.2 mRNA downstream 518051 25612122 ~ 25621265 (-) True lrrc2
XM_022670403.1 mRNA upstream 10959 26188106 ~ 26529204 (-) False fbxl17
XM_007254067.3 mRNA upstream 382754 26559901 ~ 26569939 (-) False LOC103042298
XM_022670413.1 mRNA upstream 396535 26573682 ~ 26575743 (-) False ccl28
XM_007254071.3 mRNA upstream 417193 26594340 ~ 26599322 (-) False ubox5
XM_007254070.3 mRNA upstream 417193 26594340 ~ 26599322 (-) False ubox5
trnak-uuu_38 other downstream 543319 25595925 ~ 25595997 (-) True trnak-uuu_38
trnak-uuu_37 other downstream 544152 25595092 ~ 25595164 (-) True trnak-uuu_37
trnak-uuu_36 other downstream 544985 25594259 ~ 25594331 (-) True trnak-uuu_36
trnak-uuu_35 other downstream 546399 25592845 ~ 25592917 (-) True trnak-uuu_35
trnak-uuu_34 other downstream 547811 25591433 ~ 25591505 (-) True trnak-uuu_34
TU73603 other upstream 381259 26558406 ~ 26569931 (-) True LOC103042298
TU73608 other upstream 396253 26573400 ~ 26575743 (-) True ccl28
TU73957 other upstream 989539 27166686 ~ 27168510 (-) True G54854
TU73985 other upstream 1292071 27469218 ~ 27473347 (-) True G54873
TU74086 other upstream 1551564 27728711 ~ 27731079 (-) True G54947

Expression Profile