Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_007230972.3 |
| length | 1378 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 6 |
| gene id | pigf |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035902.1 |
| NCBI id | CM008305.1 |
| chromosome length | 52532229 |
| location | 20541864 ~ 20556330 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0006506 | GPI anchor biosynthetic process | biological_process |
| GO:0005789 | endoplasmic reticulum membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004307 | ethanolaminephosphotransferase activity | molecular_function |
| id | description |
|---|---|
| K05287 | PIGF; GPI ethanolamine phosphate transferase 2/3 subunit F |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU72136 | lncRNA | downstream | 189013 | 20342395 ~ 20352851 (-) | True | G53499 |
| TU72137 | lncRNA | downstream | 226281 | 20314294 ~ 20315583 (-) | True | G53500 |
| TU72139 | lncRNA | downstream | 227818 | 20313128 ~ 20314046 (-) | True | G53502 |
| TU72102 | lncRNA | downstream | 425865 | 20059899 ~ 20115999 (-) | False | G53469 |
| TU72214 | lncRNA | upstream | 50447 | 20606777 ~ 20607592 (-) | True | G53559 |
| TU72224 | lncRNA | upstream | 64393 | 20620723 ~ 20646509 (-) | True | G53563 |
| TU72223 | lncRNA | upstream | 65239 | 20621569 ~ 20690422 (-) | False | G53562 |
| TU72209 | lncRNA | upstream | 79976 | 20636306 ~ 20637291 (-) | True | G53556 |
| TU72234 | lncRNA | upstream | 199303 | 20755633 ~ 20755885 (-) | True | G53573 |
| XM_022670339.1 | mRNA | downstream | 149658 | 20317213 ~ 20392206 (-) | False | LOC103047709 |
| XM_022670338.1 | mRNA | downstream | 149663 | 20316016 ~ 20392201 (-) | False | LOC103047709 |
| XM_022670337.1 | mRNA | downstream | 149663 | 20316016 ~ 20392201 (-) | True | LOC103047709 |
| XM_022670340.1 | mRNA | downstream | 149669 | 20342910 ~ 20392195 (-) | False | LOC103047709 |
| XM_007235649.3 | mRNA | downstream | 452492 | 20042497 ~ 20089372 (-) | False | LOC103035481 |
| XM_022670343.1 | mRNA | upstream | 5941 | 20562271 ~ 20568195 (-) | True | LOC103047390 |
| XM_007230971.3 | mRNA | upstream | 16082 | 20572412 ~ 20580604 (-) | True | LOC103043231 |
| XM_022670347.1 | mRNA | upstream | 428129 | 20984459 ~ 21384885 (-) | True | LOC103027095 |
| XM_022670348.1 | mRNA | upstream | 1099287 | 21655617 ~ 21669948 (-) | False | LOC103044518 |
| XM_022670350.1 | mRNA | upstream | 1099287 | 21655617 ~ 21669931 (-) | False | LOC103044518 |
| trnai-uau_7 | other | downstream | 239236 | 20302535 ~ 20302628 (-) | True | trnai-uau_7 |
| TU71983 | other | downstream | 691514 | 19849950 ~ 19850350 (-) | True | G53382 |
| TU71687 | other | downstream | 1874577 | 18586401 ~ 18667287 (-) | True | G53164 |
| TU70997 | other | downstream | 3952081 | 16588150 ~ 16589783 (-) | True | G52652 |
| TU72221 | other | upstream | 125481 | 20681811 ~ 20690422 (-) | True | G53562 |
| TU72268 | other | upstream | 227408 | 20783738 ~ 20787618 (-) | True | G53598 |
| TU72277 | other | upstream | 261509 | 20817839 ~ 20819409 (-) | True | G53607 |
| XR_002650112.1 | other | upstream | 2290346 | 22846676 ~ 22847337 (-) | True | LOC111192727 |
| TU72809 | other | upstream | 2534976 | 23091306 ~ 23091975 (-) | True | G53996 |
