Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_007250125.3 |
| length | 1187 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 3 |
| gene id | ddit4 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035902.1 |
| NCBI id | CM008305.1 |
| chromosome length | 52532229 |
| location | 21919529 ~ 21921617 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0006915 | apoptotic process | biological_process |
| GO:0009953 | dorsal/ventral pattern formation | biological_process |
| GO:0009968 | negative regulation of signal transduction | biological_process |
| GO:0005739 | mitochondrion | cellular_component |
| id | description |
|---|---|
| K08270 | DDIT4, REDD1; DNA-damage-inducible transcript 4 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU72614 | lncRNA | downstream | 2770 | 21907685 ~ 21916759 (-) | False | G53856 |
| TU72615 | lncRNA | downstream | 2770 | 21907685 ~ 21916759 (-) | False | G53856 |
| TU72617 | lncRNA | downstream | 2770 | 21907685 ~ 21916759 (-) | True | G53856 |
| TU72613 | lncRNA | downstream | 2770 | 21915288 ~ 21916759 (-) | False | G53856 |
| TU72618 | lncRNA | downstream | 2770 | 21915288 ~ 21916759 (-) | False | G53856 |
| TU72638 | lncRNA | upstream | 18985 | 21940602 ~ 21941350 (-) | True | G53868 |
| TU72708 | lncRNA | upstream | 235372 | 22156989 ~ 22158000 (-) | True | G53918 |
| TU72715 | lncRNA | upstream | 276631 | 22198248 ~ 22298487 (-) | True | G53924 |
| TU72717 | lncRNA | upstream | 395777 | 22317394 ~ 22409390 (-) | True | G53926 |
| TU72719 | lncRNA | upstream | 395777 | 22317394 ~ 22449619 (-) | False | G53926 |
| XM_007250121.3 | mRNA | downstream | 34088 | 21873489 ~ 21885441 (-) | True | narf |
| XM_007250120.3 | mRNA | downstream | 49255 | 21830839 ~ 21870274 (-) | True | LOC103047279 |
| XM_022670348.1 | mRNA | downstream | 249581 | 21655617 ~ 21669948 (-) | False | LOC103044518 |
| XM_022670350.1 | mRNA | downstream | 249598 | 21655617 ~ 21669931 (-) | False | LOC103044518 |
| XM_022670349.1 | mRNA | downstream | 249743 | 21655617 ~ 21669786 (-) | True | LOC103044518 |
| XM_007250124.3 | mRNA | upstream | 11652 | 21933269 ~ 21938448 (-) | True | anapc16 |
| XM_007250129.3 | mRNA | upstream | 124879 | 22046496 ~ 22054088 (-) | True | LOC103023380 |
| XM_022670358.1 | mRNA | upstream | 124879 | 22046496 ~ 22053903 (-) | False | LOC103023380 |
| XM_007250130.3 | mRNA | upstream | 135356 | 22056973 ~ 22065003 (-) | True | LOC103023701 |
| XM_022670368.1 | mRNA | upstream | 2572698 | 24494315 ~ 24607305 (-) | True | zeb1 |
| TU72277 | other | downstream | 1100120 | 20817839 ~ 20819409 (-) | True | G53607 |
| TU72268 | other | downstream | 1131911 | 20783738 ~ 20787618 (-) | True | G53598 |
| TU72221 | other | downstream | 1229107 | 20681811 ~ 20690422 (-) | True | G53562 |
| trnai-uau_7 | other | downstream | 1616901 | 20302535 ~ 20302628 (-) | True | trnai-uau_7 |
| TU71983 | other | downstream | 2069179 | 19849950 ~ 19850350 (-) | True | G53382 |
| XR_002650112.1 | other | upstream | 925059 | 22846676 ~ 22847337 (-) | True | LOC111192727 |
| TU72809 | other | upstream | 1169689 | 23091306 ~ 23091975 (-) | True | G53996 |
| TU73059 | other | upstream | 2419783 | 24341400 ~ 24351936 (-) | True | G54205 |
| XR_002650051.1 | other | upstream | 2865577 | 24787194 ~ 24878022 (-) | False | svil |
| trnak-uuu | other | upstream | 3644657 | 25566274 ~ 25566346 (-) | True | trnak-uuu |
