RNA id: XM_007259717.2


Basic Information

Item Value
RNA id XM_007259717.2
length 1713
RNA type mRNA
GC content 0.48
exon number 3
gene id grem2
representative True

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 18581880 ~ 18610419 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

gagtgggagagagaaagatagaaaggtttagagagagagagagagagagaggtagagttagaGTTGGTCTGATTTTGTTTGGTGATCGGAGCCAATAGAAATCCTGCGGTTTGATAAGATCCACATGCGGTTGGACGCTGAAGAGCCAGAAACACGAGTTCAAACACAgcgggcacacacacacacacacactcacacacactcacacactttcacatctagagacagagagagagagtgagagagagaagaggaggaagagtgactcagacagacagaaggacAGAGGGTGGACAAGAGGGACAAGCTTCCTACAGTGAGGAACATCAAATTCTGGACTCAGAAGCAGAACCTTTACTCAAAAGATCTCTAGCCCTACAGAGAACCCTGGACACTGCAGAACCGTAACCCAGGAGAACCCTGACCCAGCAGAACCCTGCAGGACACTCGCTTTGGAGGCGCATCctctccaccacctccaccaccgcCAATGGGCATCAGCACTGCCTCCTGTCCAGGATCCTCACACCGCTCGCCCTGACCACTACATctggaatacacacacacactcccacccTCGGACCCTCGGACACACACTCTGAGCCGGACCACTGCAGACGGGAGgatGTGCTATAAGCTGCTACTGTGGGTCCTGCTGGCCGCCGTGCTGTGTGCCCTGTCCGAATCCCGCAAGAACCGCCCCCAGGGCTCCATCCCCTCTCCGTTCAAGACCAGCTCCAACACCTCAGATCGCCGCGGCCGCAAGCAGGAAGTACTGGCCTCCAGTCAGGAAGCGCTGGTGGTAACAGAGAGGAAGTACCTGAAGAGCGACTGGTGCAAGACCCAGCCTCTGCGGCAGACGGTGAGCCAGGAGGGCTGCCGGAGTCGCACCATCATCAACCGCTTCTGCTACGGCCAGTGCAACTCCTTCTACATCCCGCGCCATGTCAAAAAGGAGCAGGAGAGCTTCCAGTCCTGCGCCTTCTGCCGCCCGCACCGGTTCACCACGCTCACCGTGGAGCTGGACTGCCACCTGCAGCCGCCGTTCCGGCACCGGAAGATCCAGCGCGTCAAGCAGTGCCGGTGCATCTCCGTCAGCGTGGCCGAGTCCGGGAAACAATAAGACTGAGAGACGGACTGCGGGAGCCTGCTGTGGACAtctaaacaacatttaaaacaaaaaaaacatacgaGAAACTCTTTGATTTATAGATTTTGATACTTTATTATATAGGCAGTGTGCCCAAAGCTGCTAATCTATTTTGAAAGGTCTAGGGCTGCCAACATCattctttcagtttttattattatacacttaCTCCATTTCCAATTCCTCAACAGTACCAACATcatcaacaccaccaccatcattatCCTGAACCTCAAAATCCCTAAATCCTGTTTTCTTTGTTCCTGTGTTAAGAAGgttatgtgtgtttatggagcTTAAAGGCTGATAcaagtattttaatttaaatcaagcatttaattttttaattctaattGCATAAATTGTCAGATTTAAACAATTCAGATCCATAATTTCAAATTTAGAAAGATTCAGAAAGAACTGAATTTAGAACTGAAACATTTTCCAGGAGACAGATTTGAATTTATGAAACTGAAATCTATTATTGACTGAAAACTCAGACATACGACTTAGTCTAGAGAAAAAACTACAGGTgcatcttttatatatatatatatatatat

Function

GO:

id name namespace
GO:0003230 cardiac atrium development biological_process
GO:0061312 BMP signaling pathway involved in heart development biological_process
GO:0060536 cartilage morphogenesis biological_process
GO:0005576 extracellular region cellular_component

KEGG:

id description
K23318 GREM; gremlin

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU71646 lncRNA downstream 178480 18402279 ~ 18403400 (-) True G53139
TU71640 lncRNA downstream 182732 18350272 ~ 18399148 (-) True G53135
TU71644 lncRNA downstream 194888 18385769 ~ 18386992 (-) True G53138
TU71645 lncRNA downstream 194888 18386256 ~ 18386992 (-) False G53138
TU71446 lncRNA downstream 392213 18189467 ~ 18189667 (-) True G52995
TU71703 lncRNA upstream 35460 18645879 ~ 18646876 (-) True G53175
TU71693 lncRNA upstream 43773 18654192 ~ 18698127 (-) True G53168
TU71716 lncRNA upstream 167742 18778161 ~ 18867587 (-) True G53184
TU71720 lncRNA upstream 168295 18778714 ~ 18786708 (-) True G53185
TU71740 lncRNA upstream 238310 18848729 ~ 18892877 (-) True G53199
XM_007241903.2 mRNA downstream 912155 17668664 ~ 17669725 (-) True LOC103035822
XM_022670308.1 mRNA downstream 916619 17648451 ~ 17665261 (-) True LOC103035515
XM_022670301.1 mRNA downstream 1105289 17468051 ~ 17476591 (-) True LOC111192622
XM_022670297.1 mRNA downstream 1117587 17189815 ~ 17464293 (-) False LOC103037795
XM_022670298.1 mRNA downstream 1117587 17189815 ~ 17464293 (-) True LOC103037795
XM_007259720.3 mRNA upstream 34036 18644455 ~ 18648875 (-) False nat9
XM_007259719.3 mRNA upstream 34036 18644455 ~ 18648875 (-) True nat9
XM_007259722.3 mRNA upstream 46413 18656832 ~ 18689601 (-) True LOC103024498
XM_007259723.3 mRNA upstream 46413 18656832 ~ 18689600 (-) False LOC103024498
XM_007259721.3 mRNA upstream 46413 18656832 ~ 18689599 (-) False LOC103024498
TU70997 other downstream 1992097 16588150 ~ 16589783 (-) True G52652
TU70998 other downstream 1992097 16588150 ~ 16589783 (-) False G52652
XR_002650036.1 other downstream 2154267 16406719 ~ 16427613 (-) False zcchc4
TU70803 other downstream 2354706 16226236 ~ 16227174 (-) True G52503
TU70793 other downstream 2396568 16182735 ~ 16185312 (-) True G52493
TU71983 other upstream 1239531 19849950 ~ 19850350 (-) True G53382
trnai-uau_7 other upstream 1692116 20302535 ~ 20302628 (-) True trnai-uau_7
TU72221 other upstream 2071392 20681811 ~ 20690422 (-) True G53562
TU72268 other upstream 2173319 20783738 ~ 20787618 (-) True G53598
TU72277 other upstream 2207420 20817839 ~ 20819409 (-) True G53607

Expression Profile