Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_002650045.1 |
| length | 376 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 4 |
| gene id | LOC111192637 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035902.1 |
| NCBI id | CM008305.1 |
| chromosome length | 52532229 |
| location | 23063904 ~ 23255571 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU72799 | lncRNA | downstream | 92200 | 22964001 ~ 22971704 (-) | True | G53986 |
| TU72788 | lncRNA | downstream | 119923 | 22943770 ~ 22943981 (-) | True | G53982 |
| TU72786 | lncRNA | downstream | 155855 | 22907826 ~ 22908049 (-) | True | G53980 |
| TU72780 | lncRNA | downstream | 177970 | 22858391 ~ 22885934 (-) | False | G53976 |
| TU72838 | lncRNA | upstream | 22045 | 23276834 ~ 23277253 (-) | True | G54021 |
| TU72844 | lncRNA | upstream | 67900 | 23322689 ~ 23322999 (-) | True | G54027 |
| TU72845 | lncRNA | upstream | 127933 | 23382722 ~ 23383118 (-) | True | G54028 |
| TU72846 | lncRNA | upstream | 142024 | 23396813 ~ 23397047 (-) | True | G54029 |
| TU72848 | lncRNA | upstream | 179234 | 23434023 ~ 23434272 (-) | True | G54031 |
| XM_007250130.3 | mRNA | downstream | 998901 | 22056973 ~ 22065003 (-) | True | LOC103023701 |
| XM_007250129.3 | mRNA | downstream | 1009816 | 22046496 ~ 22054088 (-) | True | LOC103023380 |
| XM_022670358.1 | mRNA | downstream | 1010001 | 22046496 ~ 22053903 (-) | False | LOC103023380 |
| XM_007250124.3 | mRNA | downstream | 1125456 | 21933269 ~ 21938448 (-) | True | anapc16 |
| XM_007250125.3 | mRNA | downstream | 1142287 | 21919529 ~ 21921617 (-) | True | ddit4 |
| XM_022670368.1 | mRNA | upstream | 1239526 | 24494315 ~ 24607305 (-) | True | zeb1 |
| XM_022670382.1 | mRNA | upstream | 1531462 | 24786251 ~ 24920590 (-) | False | svil |
| XM_022670372.1 | mRNA | upstream | 1531462 | 24786251 ~ 24902417 (-) | False | svil |
| XM_022670376.1 | mRNA | upstream | 1531462 | 24786251 ~ 24878021 (-) | False | svil |
| XM_022670375.1 | mRNA | upstream | 1531462 | 24786251 ~ 24878021 (-) | False | svil |
| XR_002650112.1 | other | downstream | 216567 | 22846676 ~ 22847337 (-) | True | LOC111192727 |
| TU72277 | other | downstream | 2244495 | 20817839 ~ 20819409 (-) | True | G53607 |
| TU72268 | other | downstream | 2276286 | 20783738 ~ 20787618 (-) | True | G53598 |
| TU72221 | other | downstream | 2373482 | 20681811 ~ 20690422 (-) | True | G53562 |
| trnai-uau_7 | other | downstream | 2761276 | 20302535 ~ 20302628 (-) | True | trnai-uau_7 |
| TU73059 | other | upstream | 1086611 | 24341400 ~ 24351936 (-) | True | G54205 |
| XR_002650051.1 | other | upstream | 1532405 | 24787194 ~ 24878022 (-) | False | svil |
| trnak-uuu | other | upstream | 2311485 | 25566274 ~ 25566346 (-) | True | trnak-uuu |
| trnak-uuu_1 | other | upstream | 2312352 | 25567141 ~ 25567213 (-) | True | trnak-uuu_1 |
| trnak-uuu_2 | other | upstream | 2312604 | 25567393 ~ 25567465 (-) | True | trnak-uuu_2 |
