Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_002650050.1 |
| length | 576 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 3 |
| gene id | LOC111192640 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035902.1 |
| NCBI id | CM008305.1 |
| chromosome length | 52532229 |
| location | 24616045 ~ 24637375 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_002650049.1 | lncRNA | downstream | 11385 | 24604025 ~ 24604660 (-) | True | LOC111192639 |
| TU73083 | lncRNA | downstream | 123075 | 24492701 ~ 24492970 (-) | True | G54227 |
| TU73080 | lncRNA | downstream | 152913 | 24459779 ~ 24463132 (-) | True | G54224 |
| TU73057 | lncRNA | downstream | 264109 | 24345126 ~ 24351936 (-) | False | G54205 |
| TU73056 | lncRNA | downstream | 275220 | 24340011 ~ 24340825 (-) | True | G54204 |
| TU73097 | lncRNA | upstream | 80106 | 24717481 ~ 24718187 (-) | True | G54237 |
| TU73098 | lncRNA | upstream | 88422 | 24725797 ~ 24726344 (-) | True | G54238 |
| TU73099 | lncRNA | upstream | 102461 | 24739836 ~ 24740055 (-) | True | G54239 |
| TU73174 | lncRNA | upstream | 173445 | 24810820 ~ 24812627 (-) | True | G54276 |
| TU73225 | lncRNA | upstream | 313272 | 24950647 ~ 24953838 (-) | False | jcad |
| XM_022670368.1 | mRNA | downstream | 8740 | 24494315 ~ 24607305 (-) | True | zeb1 |
| XM_007250130.3 | mRNA | downstream | 2551042 | 22056973 ~ 22065003 (-) | True | LOC103023701 |
| XM_007250129.3 | mRNA | downstream | 2561957 | 22046496 ~ 22054088 (-) | True | LOC103023380 |
| XM_022670358.1 | mRNA | downstream | 2562142 | 22046496 ~ 22053903 (-) | False | LOC103023380 |
| XM_007250124.3 | mRNA | downstream | 2677597 | 21933269 ~ 21938448 (-) | True | anapc16 |
| XM_022670382.1 | mRNA | upstream | 148876 | 24786251 ~ 24920590 (-) | False | svil |
| XM_022670372.1 | mRNA | upstream | 148876 | 24786251 ~ 24902417 (-) | False | svil |
| XM_022670376.1 | mRNA | upstream | 148876 | 24786251 ~ 24878021 (-) | False | svil |
| XM_022670375.1 | mRNA | upstream | 148876 | 24786251 ~ 24878021 (-) | False | svil |
| XM_022670380.1 | mRNA | upstream | 148876 | 24786251 ~ 24878021 (-) | False | svil |
| TU73059 | other | downstream | 264109 | 24341400 ~ 24351936 (-) | True | G54205 |
| TU72809 | other | downstream | 1524070 | 23091306 ~ 23091975 (-) | True | G53996 |
| XR_002650112.1 | other | downstream | 1768708 | 22846676 ~ 22847337 (-) | True | LOC111192727 |
| TU72277 | other | downstream | 3796636 | 20817839 ~ 20819409 (-) | True | G53607 |
| TU72268 | other | downstream | 3828427 | 20783738 ~ 20787618 (-) | True | G53598 |
| XR_002650051.1 | other | upstream | 149819 | 24787194 ~ 24878022 (-) | False | svil |
| trnak-uuu | other | upstream | 928899 | 25566274 ~ 25566346 (-) | True | trnak-uuu |
| trnak-uuu_1 | other | upstream | 929766 | 25567141 ~ 25567213 (-) | True | trnak-uuu_1 |
| trnak-uuu_2 | other | upstream | 930018 | 25567393 ~ 25567465 (-) | True | trnak-uuu_2 |
| trnak-uuu_3 | other | upstream | 930270 | 25567645 ~ 25567717 (-) | True | trnak-uuu_3 |
