RNA id: trnak-uuu_1



Basic Information


Item Value
RNA id trnak-uuu_1
length 73
RNA type tRNA
GC content 0.56
exon number 1
gene id trnak-uuu_1
representative True

Chromosome Information


Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 25567141 ~ 25567213 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


gcccggatggctcagtcggtagagcatcagacttttaatctgagggtccagggttcaagtccctgttcgggcg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU73420 lncRNA downstream 5002 25550321 ~ 25562139 (-) False fam240a
TU73402 lncRNA downstream 41972 25524104 ~ 25525169 (-) True G54448
TU73401 lncRNA downstream 41972 25524519 ~ 25525169 (-) False G54448
TU73290 lncRNA downstream 223728 25341697 ~ 25343413 (-) True G54360
TU73288 lncRNA downstream 226261 25337766 ~ 25340880 (-) False G54358
TU73430 lncRNA upstream 35204 25602417 ~ 25605207 (-) True G54466
TU73444 lncRNA upstream 62582 25629795 ~ 25633221 (-) True G54471
TU73463 lncRNA upstream 82241 25649454 ~ 25694995 (-) True G54486
TU73467 lncRNA upstream 161170 25728383 ~ 25728601 (-) True G54490
TU73475 lncRNA upstream 187509 25754722 ~ 25755060 (-) True G54498
XM_022670400.1 mRNA downstream 5074 25549350 ~ 25562067 (-) True fam240a
XM_007260763.3 mRNA downstream 22614 25541306 ~ 25544527 (-) True LOC103035302
XM_007260769.2 mRNA downstream 26742 25532060 ~ 25540399 (-) True LOC103036837
XM_007260765.3 mRNA downstream 46915 25510629 ~ 25520226 (-) False LOC103035606
XM_015607074.2 mRNA upstream 44909 25612122 ~ 25621265 (-) True lrrc2
XM_007254050.3 mRNA upstream 44909 25612122 ~ 25619657 (-) False lrrc2
XM_022670401.1 mRNA upstream 44909 25612122 ~ 25619657 (-) False lrrc2
XM_007254049.3 mRNA upstream 44909 25612122 ~ 25619657 (-) False lrrc2
XM_007254052.3 mRNA upstream 213216 25780429 ~ 25966065 (-) True efna5
trnak-uuu other downstream 795 25566274 ~ 25566346 (-) True trnak-uuu
XR_002650051.1 other downstream 689119 24787194 ~ 24878022 (-) False svil
TU73059 other downstream 1215205 24341400 ~ 24351936 (-) True G54205
TU72809 other downstream 2475166 23091306 ~ 23091975 (-) True G53996
XR_002650112.1 other downstream 2719804 22846676 ~ 22847337 (-) True LOC111192727
trnak-uuu_2 other upstream 180 25567393 ~ 25567465 (-) True trnak-uuu_2
trnak-uuu_3 other upstream 432 25567645 ~ 25567717 (-) True trnak-uuu_3
trnak-uuu_4 other upstream 684 25567897 ~ 25567969 (-) True trnak-uuu_4
trnak-uuu_5 other upstream 936 25568149 ~ 25568221 (-) True trnak-uuu_5
trnak-uuu_6 other upstream 1347 25568560 ~ 25568632 (-) True trnak-uuu_6