RNA id: trnak-uuu_11


Basic Information

Item Value
RNA id trnak-uuu_11
length 73
RNA type tRNA
GC content 0.58
exon number 1
gene id trnak-uuu_11
representative True

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 25570729 ~ 25570801 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

gcccggatggctcagtcggtagagcatcagacttttaatctgagggtccagggttcaagtccctgttcgggcg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU73420 lncRNA downstream 8590 25550321 ~ 25562139 (-) False fam240a
TU73402 lncRNA downstream 45560 25524104 ~ 25525169 (-) True G54448
TU73401 lncRNA downstream 45560 25524519 ~ 25525169 (-) False G54448
TU73290 lncRNA downstream 227316 25341697 ~ 25343413 (-) True G54360
TU73288 lncRNA downstream 229849 25337766 ~ 25340880 (-) False G54358
TU73430 lncRNA upstream 31616 25602417 ~ 25605207 (-) True G54466
TU73444 lncRNA upstream 58994 25629795 ~ 25633221 (-) True G54471
TU73463 lncRNA upstream 78653 25649454 ~ 25694995 (-) True G54486
TU73467 lncRNA upstream 157582 25728383 ~ 25728601 (-) True G54490
TU73475 lncRNA upstream 183921 25754722 ~ 25755060 (-) True G54498
XM_022670400.1 mRNA downstream 8662 25549350 ~ 25562067 (-) True fam240a
XM_007260763.3 mRNA downstream 26202 25541306 ~ 25544527 (-) True LOC103035302
XM_007260769.2 mRNA downstream 30330 25532060 ~ 25540399 (-) True LOC103036837
XM_007260765.3 mRNA downstream 50503 25510629 ~ 25520226 (-) False LOC103035606
XM_015607074.2 mRNA upstream 41321 25612122 ~ 25621265 (-) True lrrc2
XM_007254050.3 mRNA upstream 41321 25612122 ~ 25619657 (-) False lrrc2
XM_022670401.1 mRNA upstream 41321 25612122 ~ 25619657 (-) False lrrc2
XM_007254049.3 mRNA upstream 41321 25612122 ~ 25619657 (-) False lrrc2
XM_007254052.3 mRNA upstream 209628 25780429 ~ 25966065 (-) True efna5
trnak-uuu_10 other downstream 509 25570148 ~ 25570220 (-) True trnak-uuu_10
trnak-uuu_9 other downstream 761 25569896 ~ 25569968 (-) True trnak-uuu_9
trnak-uuu_8 other downstream 1013 25569644 ~ 25569716 (-) True trnak-uuu_8
trnak-uuu_7 other downstream 1265 25569392 ~ 25569464 (-) True trnak-uuu_7
trnak-uuu_6 other downstream 2097 25568560 ~ 25568632 (-) True trnak-uuu_6
trnak-uuu_12 other upstream 180 25570981 ~ 25571053 (-) True trnak-uuu_12
trnak-uuu_13 other upstream 432 25571233 ~ 25571305 (-) True trnak-uuu_13
trnak-uuu_14 other upstream 1766 25572567 ~ 25572639 (-) True trnak-uuu_14
trnak-uuu_15 other upstream 6658 25577459 ~ 25577531 (-) True trnak-uuu_15
trnak-uuu_16 other upstream 7490 25578291 ~ 25578363 (-) True trnak-uuu_16