RNA id: trnak-uuu_36



Basic Information


Item Value
RNA id trnak-uuu_36
length 73
RNA type tRNA
GC content 0.58
exon number 1
gene id trnak-uuu_36
representative True

Chromosome Information


Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 25594259 ~ 25594331 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


gcccggatggctcagtcggtagagcatcagacttttaatctgagggtccagggttcaagtccctgttcgggcg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU73420 lncRNA downstream 32120 25550321 ~ 25562139 (-) False fam240a
TU73402 lncRNA downstream 69090 25524104 ~ 25525169 (-) True G54448
TU73401 lncRNA downstream 69090 25524519 ~ 25525169 (-) False G54448
TU73290 lncRNA downstream 250846 25341697 ~ 25343413 (-) True G54360
TU73288 lncRNA downstream 253379 25337766 ~ 25340880 (-) False G54358
TU73430 lncRNA upstream 8086 25602417 ~ 25605207 (-) True G54466
TU73444 lncRNA upstream 35464 25629795 ~ 25633221 (-) True G54471
TU73463 lncRNA upstream 55123 25649454 ~ 25694995 (-) True G54486
TU73467 lncRNA upstream 134052 25728383 ~ 25728601 (-) True G54490
TU73475 lncRNA upstream 160391 25754722 ~ 25755060 (-) True G54498
XM_022670400.1 mRNA downstream 32192 25549350 ~ 25562067 (-) True fam240a
XM_007260763.3 mRNA downstream 49732 25541306 ~ 25544527 (-) True LOC103035302
XM_007260769.2 mRNA downstream 53860 25532060 ~ 25540399 (-) True LOC103036837
XM_007260765.3 mRNA downstream 74033 25510629 ~ 25520226 (-) False LOC103035606
XM_015607074.2 mRNA upstream 17791 25612122 ~ 25621265 (-) True lrrc2
XM_007254050.3 mRNA upstream 17791 25612122 ~ 25619657 (-) False lrrc2
XM_022670401.1 mRNA upstream 17791 25612122 ~ 25619657 (-) False lrrc2
XM_007254049.3 mRNA upstream 17791 25612122 ~ 25619657 (-) False lrrc2
XM_007254052.3 mRNA upstream 186098 25780429 ~ 25966065 (-) True efna5
trnak-uuu_35 other downstream 1342 25592845 ~ 25592917 (-) True trnak-uuu_35
trnak-uuu_34 other downstream 2754 25591433 ~ 25591505 (-) True trnak-uuu_34
trnak-uuu_33 other downstream 3006 25591181 ~ 25591253 (-) True trnak-uuu_33
trnak-uuu_32 other downstream 4997 25589190 ~ 25589262 (-) True trnak-uuu_32
trnak-uuu_31 other downstream 5249 25588938 ~ 25589010 (-) True trnak-uuu_31
trnak-uuu_37 other upstream 761 25595092 ~ 25595164 (-) True trnak-uuu_37
trnak-uuu_38 other upstream 1594 25595925 ~ 25595997 (-) True trnak-uuu_38
TU73603 other upstream 964075 26558406 ~ 26569931 (-) True LOC103042298
TU73608 other upstream 979069 26573400 ~ 26575743 (-) True ccl28
TU73957 other upstream 1572355 27166686 ~ 27168510 (-) True G54854