RNA id: trnak-uuu_38



Basic Information


Item Value
RNA id trnak-uuu_38
length 73
RNA type tRNA
GC content 0.58
exon number 1
gene id trnak-uuu_38
representative True

Chromosome Information


Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 25595925 ~ 25595997 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


gcccggatggctcagtcggtagagcatcagacttttaatctgagggtccagggttcaagtccctgttcgggcg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU73420 lncRNA downstream 33786 25550321 ~ 25562139 (-) False fam240a
TU73402 lncRNA downstream 70756 25524104 ~ 25525169 (-) True G54448
TU73401 lncRNA downstream 70756 25524519 ~ 25525169 (-) False G54448
TU73290 lncRNA downstream 252512 25341697 ~ 25343413 (-) True G54360
TU73288 lncRNA downstream 255045 25337766 ~ 25340880 (-) False G54358
TU73430 lncRNA upstream 6420 25602417 ~ 25605207 (-) True G54466
TU73444 lncRNA upstream 33798 25629795 ~ 25633221 (-) True G54471
TU73463 lncRNA upstream 53457 25649454 ~ 25694995 (-) True G54486
TU73467 lncRNA upstream 132386 25728383 ~ 25728601 (-) True G54490
TU73475 lncRNA upstream 158725 25754722 ~ 25755060 (-) True G54498
XM_022670400.1 mRNA downstream 33858 25549350 ~ 25562067 (-) True fam240a
XM_007260763.3 mRNA downstream 51398 25541306 ~ 25544527 (-) True LOC103035302
XM_007260769.2 mRNA downstream 55526 25532060 ~ 25540399 (-) True LOC103036837
XM_007260765.3 mRNA downstream 75699 25510629 ~ 25520226 (-) False LOC103035606
XM_015607074.2 mRNA upstream 16125 25612122 ~ 25621265 (-) True lrrc2
XM_007254050.3 mRNA upstream 16125 25612122 ~ 25619657 (-) False lrrc2
XM_022670401.1 mRNA upstream 16125 25612122 ~ 25619657 (-) False lrrc2
XM_007254049.3 mRNA upstream 16125 25612122 ~ 25619657 (-) False lrrc2
XM_007254052.3 mRNA upstream 184432 25780429 ~ 25966065 (-) True efna5
trnak-uuu_37 other downstream 761 25595092 ~ 25595164 (-) True trnak-uuu_37
trnak-uuu_36 other downstream 1594 25594259 ~ 25594331 (-) True trnak-uuu_36
trnak-uuu_35 other downstream 3008 25592845 ~ 25592917 (-) True trnak-uuu_35
trnak-uuu_34 other downstream 4420 25591433 ~ 25591505 (-) True trnak-uuu_34
trnak-uuu_33 other downstream 4672 25591181 ~ 25591253 (-) True trnak-uuu_33
TU73603 other upstream 962409 26558406 ~ 26569931 (-) True LOC103042298
TU73608 other upstream 977403 26573400 ~ 26575743 (-) True ccl28
TU73957 other upstream 1570689 27166686 ~ 27168510 (-) True G54854
TU73985 other upstream 1873221 27469218 ~ 27473347 (-) True G54873
TU74086 other upstream 2132714 27728711 ~ 27731079 (-) True G54947