RNA id: trnak-uuu_5


Basic Information

Item Value
RNA id trnak-uuu_5
length 73
RNA type tRNA
GC content 0.58
exon number 1
gene id trnak-uuu_5
representative True

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 25568149 ~ 25568221 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

gcccggatagctcagtcggtagagcatcagacttttaatctgagggtccagggttcaagtccctgttcgggcg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU73420 lncRNA downstream 6010 25550321 ~ 25562139 (-) False fam240a
TU73402 lncRNA downstream 42980 25524104 ~ 25525169 (-) True G54448
TU73401 lncRNA downstream 42980 25524519 ~ 25525169 (-) False G54448
TU73290 lncRNA downstream 224736 25341697 ~ 25343413 (-) True G54360
TU73288 lncRNA downstream 227269 25337766 ~ 25340880 (-) False G54358
TU73430 lncRNA upstream 34196 25602417 ~ 25605207 (-) True G54466
TU73444 lncRNA upstream 61574 25629795 ~ 25633221 (-) True G54471
TU73463 lncRNA upstream 81233 25649454 ~ 25694995 (-) True G54486
TU73467 lncRNA upstream 160162 25728383 ~ 25728601 (-) True G54490
TU73475 lncRNA upstream 186501 25754722 ~ 25755060 (-) True G54498
XM_022670400.1 mRNA downstream 6082 25549350 ~ 25562067 (-) True fam240a
XM_007260763.3 mRNA downstream 23622 25541306 ~ 25544527 (-) True LOC103035302
XM_007260769.2 mRNA downstream 27750 25532060 ~ 25540399 (-) True LOC103036837
XM_007260765.3 mRNA downstream 47923 25510629 ~ 25520226 (-) False LOC103035606
XM_015607074.2 mRNA upstream 43901 25612122 ~ 25621265 (-) True lrrc2
XM_007254050.3 mRNA upstream 43901 25612122 ~ 25619657 (-) False lrrc2
XM_022670401.1 mRNA upstream 43901 25612122 ~ 25619657 (-) False lrrc2
XM_007254049.3 mRNA upstream 43901 25612122 ~ 25619657 (-) False lrrc2
XM_007254052.3 mRNA upstream 212208 25780429 ~ 25966065 (-) True efna5
trnak-uuu_4 other downstream 180 25567897 ~ 25567969 (-) True trnak-uuu_4
trnak-uuu_3 other downstream 432 25567645 ~ 25567717 (-) True trnak-uuu_3
trnak-uuu_2 other downstream 684 25567393 ~ 25567465 (-) True trnak-uuu_2
trnak-uuu_1 other downstream 936 25567141 ~ 25567213 (-) True trnak-uuu_1
trnak-uuu other downstream 1803 25566274 ~ 25566346 (-) True trnak-uuu
trnak-uuu_6 other upstream 339 25568560 ~ 25568632 (-) True trnak-uuu_6
trnak-uuu_7 other upstream 1171 25569392 ~ 25569464 (-) True trnak-uuu_7
trnak-uuu_8 other upstream 1423 25569644 ~ 25569716 (-) True trnak-uuu_8
trnak-uuu_9 other upstream 1675 25569896 ~ 25569968 (-) True trnak-uuu_9
trnak-uuu_10 other upstream 1927 25570148 ~ 25570220 (-) True trnak-uuu_10

Expression Profile