RNA id: trnak-uuu_7


Basic Information

Item Value
RNA id trnak-uuu_7
length 73
RNA type tRNA
GC content 0.58
exon number 1
gene id trnak-uuu_7
representative True

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 25569392 ~ 25569464 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

gcccggatggctcagtcggtagagcatcagacttttaatctgagggtccagggttcaagtccctgttcgggcg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU73420 lncRNA downstream 7253 25550321 ~ 25562139 (-) False fam240a
TU73402 lncRNA downstream 44223 25524104 ~ 25525169 (-) True G54448
TU73401 lncRNA downstream 44223 25524519 ~ 25525169 (-) False G54448
TU73290 lncRNA downstream 225979 25341697 ~ 25343413 (-) True G54360
TU73288 lncRNA downstream 228512 25337766 ~ 25340880 (-) False G54358
TU73430 lncRNA upstream 32953 25602417 ~ 25605207 (-) True G54466
TU73444 lncRNA upstream 60331 25629795 ~ 25633221 (-) True G54471
TU73463 lncRNA upstream 79990 25649454 ~ 25694995 (-) True G54486
TU73467 lncRNA upstream 158919 25728383 ~ 25728601 (-) True G54490
TU73475 lncRNA upstream 185258 25754722 ~ 25755060 (-) True G54498
XM_022670400.1 mRNA downstream 7325 25549350 ~ 25562067 (-) True fam240a
XM_007260763.3 mRNA downstream 24865 25541306 ~ 25544527 (-) True LOC103035302
XM_007260769.2 mRNA downstream 28993 25532060 ~ 25540399 (-) True LOC103036837
XM_007260765.3 mRNA downstream 49166 25510629 ~ 25520226 (-) False LOC103035606
XM_015607074.2 mRNA upstream 42658 25612122 ~ 25621265 (-) True lrrc2
XM_007254050.3 mRNA upstream 42658 25612122 ~ 25619657 (-) False lrrc2
XM_022670401.1 mRNA upstream 42658 25612122 ~ 25619657 (-) False lrrc2
XM_007254049.3 mRNA upstream 42658 25612122 ~ 25619657 (-) False lrrc2
XM_007254052.3 mRNA upstream 210965 25780429 ~ 25966065 (-) True efna5
trnak-uuu_6 other downstream 760 25568560 ~ 25568632 (-) True trnak-uuu_6
trnak-uuu_5 other downstream 1171 25568149 ~ 25568221 (-) True trnak-uuu_5
trnak-uuu_4 other downstream 1423 25567897 ~ 25567969 (-) True trnak-uuu_4
trnak-uuu_3 other downstream 1675 25567645 ~ 25567717 (-) True trnak-uuu_3
trnak-uuu_2 other downstream 1927 25567393 ~ 25567465 (-) True trnak-uuu_2
trnak-uuu_8 other upstream 180 25569644 ~ 25569716 (-) True trnak-uuu_8
trnak-uuu_9 other upstream 432 25569896 ~ 25569968 (-) True trnak-uuu_9
trnak-uuu_10 other upstream 684 25570148 ~ 25570220 (-) True trnak-uuu_10
trnak-uuu_11 other upstream 1265 25570729 ~ 25570801 (-) True trnak-uuu_11
trnak-uuu_12 other upstream 1517 25570981 ~ 25571053 (-) True trnak-uuu_12