Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00000113 |
| length | 1302 |
| lncRNA type | lincRNA |
| GC content | 0.41 |
| exon number | 3 |
| gene id | XLOC_000056 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007112.7 |
| NCBI id | CM002885.2 |
| chromosome length | 59578282 |
| location | 4598060 ~ 4680477 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00003016 | lncRNA | upstream | 877457 | 3718666 ~ 3720603 (+) | True | XLOC_000053 |
| TCONS_00000101 | lncRNA | upstream | 2298514 | 2296591 ~ 2299546 (+) | True | XLOC_000048 |
| TCONS_00002808 | lncRNA | upstream | 2574415 | 2023409 ~ 2023645 (+) | True | XLOC_000044 |
| TCONS_00003015 | lncRNA | upstream | 2592428 | 2001716 ~ 2005632 (+) | True | XLOC_000043 |
| TCONS_00000077 | lncRNA | upstream | 2698217 | 1898909 ~ 1899843 (+) | True | XLOC_000039 |
| TCONS_00002809 | lncRNA | downstream | 220983 | 4901460 ~ 5030155 (+) | True | XLOC_000057 |
| TCONS_00003018 | lncRNA | downstream | 631002 | 5311479 ~ 5313595 (+) | False | XLOC_000059 |
| TCONS_00003017 | lncRNA | downstream | 631002 | 5311479 ~ 5313595 (+) | True | XLOC_000059 |
| TCONS_00003019 | lncRNA | downstream | 1026493 | 5706970 ~ 5728684 (+) | True | XLOC_000064 |
| TCONS_00003020 | lncRNA | downstream | 1114536 | 5795013 ~ 5799092 (+) | False | XLOC_000065 |
| TCONS_00000112 | mRNA | upstream | 443728 | 4101741 ~ 4154332 (+) | True | XLOC_000055 |
| TCONS_00000110 | mRNA | upstream | 1562041 | 2712956 ~ 3036019 (+) | True | XLOC_000052 |
| TCONS_00000106 | mRNA | upstream | 2153850 | 2301974 ~ 2444210 (+) | False | XLOC_000050 |
| TCONS_00000109 | mRNA | upstream | 2154288 | 2431956 ~ 2443772 (+) | True | XLOC_000050 |
| TCONS_00000105 | mRNA | upstream | 2188934 | 2301974 ~ 2409126 (+) | False | XLOC_000050 |
| TCONS_00000114 | mRNA | downstream | 593004 | 5273481 ~ 5277583 (+) | False | XLOC_000058 |
| TCONS_00000115 | mRNA | downstream | 595334 | 5275811 ~ 5277577 (+) | True | XLOC_000058 |
| TCONS_00000116 | mRNA | downstream | 721999 | 5402476 ~ 5419116 (+) | False | XLOC_000060 |
| TCONS_00000118 | mRNA | downstream | 741962 | 5422439 ~ 5434261 (+) | False | XLOC_000061 |
| TCONS_00000119 | mRNA | downstream | 742099 | 5422576 ~ 5426706 (+) | True | XLOC_000061 |
| TCONS_00000111 | other | upstream | 838026 | 3759924 ~ 3760034 (+) | True | XLOC_000054 |
| TCONS_00000104 | other | upstream | 2156377 | 2301972 ~ 2441683 (+) | False | XLOC_000050 |
| TCONS_00000108 | other | upstream | 2194836 | 2403103 ~ 2403224 (+) | True | XLOC_000051 |
| TCONS_00000102 | other | upstream | 2295437 | 2301958 ~ 2302623 (+) | False | XLOC_000050 |
| TCONS_00000100 | other | upstream | 2298514 | 2286849 ~ 2299546 (+) | False | XLOC_000048 |
| TCONS_00000117 | other | downstream | 722057 | 5402534 ~ 5418507 (+) | True | XLOC_000060 |
| TCONS_00000120 | other | downstream | 756913 | 5437390 ~ 5487162 (+) | False | XLOC_000062 |
| TCONS_00000121 | other | downstream | 758266 | 5438743 ~ 5450444 (+) | False | XLOC_000062 |
| TCONS_00000123 | other | downstream | 816808 | 5497285 ~ 5502084 (+) | True | XLOC_000062 |
| TCONS_00000134 | other | downstream | 1501865 | 6182342 ~ 6185532 (+) | False | XLOC_000067 |
