Item | Value |
---|---|
RNA id | TU58828 |
length | 460 |
lncRNA type | intronic |
GC content | 0.37 |
exon number | 1 |
gene id | G51638 |
representative | True |
Item | Value |
---|---|
chromosome id | CI01000009 |
NCBI id | null |
chromosome length | 16003125 |
location | 3309078 ~ 3309537 (+) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
species | grasscarp (Ctenopharyngodon idella) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU58827 | lncRNA | upstream | 319 | 3308526 ~ 3308759 (+) | True | G51637 |
TU58759 | lncRNA | upstream | 18268 | 3287328 ~ 3290810 (+) | True | G51569 |
TU58775 | lncRNA | upstream | 46119 | 3262336 ~ 3262959 (+) | True | G51585 |
TU58771 | lncRNA | upstream | 47069 | 3261197 ~ 3262009 (+) | True | G51581 |
TU58779 | lncRNA | upstream | 85213 | 3222759 ~ 3223865 (+) | True | G51589 |
TU58829 | lncRNA | downstream | 1417 | 3310954 ~ 3311469 (+) | True | G51639 |
TU58849 | lncRNA | downstream | 118029 | 3427566 ~ 3427773 (+) | True | G51659 |
TU58866 | lncRNA | downstream | 285767 | 3595304 ~ 3599012 (+) | True | G51673 |
TU58938 | lncRNA | downstream | 300698 | 3610235 ~ 3610474 (+) | True | G51734 |
TU58939 | lncRNA | downstream | 300943 | 3610480 ~ 3610852 (+) | True | G51735 |
CI01000009_03301176_03305406.mRNA | mRNA | upstream | 3483 | 3301176 ~ 3305595 (+) | True | CI01000009_03301176_03305406 |
CI01000009_03276572_03283625.mRNA | mRNA | upstream | 25072 | 3276572 ~ 3284006 (+) | True | CI01000009_03276572_03283625 |
CI01000009_03211734_03220047.mRNA | mRNA | upstream | 87771 | 3211734 ~ 3221307 (+) | False | CI01000009_03211734_03220047 |
CI01000009_03202999_03207060.mRNA | mRNA | upstream | 101650 | 3202207 ~ 3207428 (+) | False | CI01000009_03202999_03207060 |
CI01000009_03164135_03169470.mRNA | mRNA | upstream | 138938 | 3162318 ~ 3170140 (+) | True | CI01000009_03164135_03169470 |
CI01000009_03313112_03329470.mRNA | mRNA | downstream | 3575 | 3313112 ~ 3329510 (+) | True | CI01000009_03313112_03329470 |
CI01000009_03330968_03333405.mRNA | mRNA | downstream | 21048 | 3330585 ~ 3333453 (+) | True | CI01000009_03330968_03333405 |
CI01000009_03335503_03355421.mRNA | mRNA | downstream | 25966 | 3335503 ~ 3355426 (+) | True | CI01000009_03335503_03355421 |
CI01000009_03466999_03473248.mRNA | mRNA | downstream | 157316 | 3466853 ~ 3473414 (+) | True | CI01000009_03466999_03473248 |
CI01000009_03650884_03661357.mRNA | mRNA | downstream | 341347 | 3650884 ~ 3661357 (+) | True | CI01000009_03650884_03661357 |
TU58746 | other | upstream | 100094 | 3202772 ~ 3208984 (+) | False | CI01000009_03202999_03207060 |
TU58751 | other | upstream | 100555 | 3202772 ~ 3208523 (+) | False | CI01000009_03202999_03207060 |
TU58749 | other | upstream | 100772 | 3202772 ~ 3208306 (+) | False | CI01000009_03202999_03207060 |
TU58745 | other | upstream | 101154 | 3202772 ~ 3207924 (+) | False | CI01000009_03202999_03207060 |
TU58748 | other | upstream | 101154 | 3202905 ~ 3207924 (+) | True | CI01000009_03202999_03207060 |
TU60796 | other | downstream | 2212705 | 5522242 ~ 5522356 (+) | False | G53388 |
TU60791 | other | downstream | 2225708 | 5535245 ~ 5538095 (+) | False | G53388 |
TU61110 | other | downstream | 2550765 | 5860302 ~ 5860756 (+) | True | G53655 |
TU61103 | other | downstream | 2936027 | 6245564 ~ 6248392 (+) | True | G53651 |
TU63847 | other | downstream | 5819763 | 9129300 ~ 9130286 (+) | True | G56100 |