RNA id: CI01000024_00931895_00936667.mRNA


Basic Information

Item Value
RNA id CI01000024_00931895_00936667.mRNA
length 1214
RNA type mRNA
GC content 0.51
exon number 4
gene id CI01000024_00931895_00936667
representative True

Chromosome Information

Item Value
chromosome id CI01000024
NCBI id null
chromosome length 8644187
location 931742 ~ 936831 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AGAGAGAAATATGAAAATAGAGGTATGGATGAGAAAGAGCGAAGAAAATGTTCACCATTGCTTCAACATATAGCATGGTATGCCACCCTAACTTATAATTTTTAGTCTCTACAAGCCAAATAGTTCCTCTGTGATTCTATGAGGTCCAGATTAATGATGCCCCCATGGAGATGTTTCTGAAGGACAGTATGTGTGAGGGAACGTCTGATCGCCCCTGCACCCTCACCATGGGACCAGGTTCAACGGATCTACAGGCCCGCAGGGTGGACCAGACAGCCACAGCGTTCCCACTCTGTATCCAGGCTAATTTCATAAAAGACGGAGAATATTCCCACAGAAAGCACGGTTACCCCCTAGTAGAGTGTCAGTCCACTGTGTTCTCTTCCCCAGCCAGCTGGCAGCTCGTCAGGGGCAGGGCGGCTCTCCGCTCCCTGCTCTCGTCACTCGGCAGTGGGGAGGACAGGCTGACTGGCTGGCATATGCTGGATTCGACCTCCACATGCCACTGTGGTGCTCTCCGTCTCTCAGCCCGGCTCAGTGTCCATCAGTCGTCGCAGAGATCACACAATTTACCTCCGCTAGCAGATTATCGCCCCACGCTTTGCGCTGTTTGCACAGCATACCCACCATGTAAAAGCCAGTTTCGGCATGGTCACGGTAGACCTTTCATCTGCATGACTGGCAGCCGTATTCCACCACAGTTGGGCCTGAGTGAGATATCCAGGTCTAGCCAGGAGAGACTTTTCCTAAATGAAGCCCACAGTGGGGGGGATCCCTCGCAGGTGTCTCCCTGGTTAGTGGAAGGCCTGTTTGGCGATGCCGAATGCCCCAAGCACTGCCAGGCTATTTACATCCTCTGTGCATGTCCAATCAGACTGGGCTTCCAGGGAAACACGTTTTGCATCCAGCCTGGTGCTCAAACACAGAACACTGATCTAAGAACCCATGCTGTTGCTCCACCACTGCAGGACCCTACTGATCCAGAAGAGGAAGGAGAGAAAGAGAGAGAGAGGTGGATTGAGCCTCAGCCTTGTCAGGATGGATTAAAGGAAAGTCTTTGAGGGTTTTTCAGAAATGCTGAAACTGAGCTTCCTGCTCTCCGCAGTTCTTTCACTCCTGGCTCTCGCTTTTATCCTTCATTTTATCTCAAGCCGTTCATTAATAGTCCCTGAAATTAACGAGCACGTCATACATCCGTGAACACCTTCAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU137896 lncRNA downstream 25798 874427 ~ 905944 (-) True G121423
TU137888 lncRNA downstream 83280 845994 ~ 848462 (-) True G121415
TU137884 lncRNA downstream 89723 838695 ~ 842019 (-) True G121412
TU137871 lncRNA downstream 273995 657431 ~ 657747 (-) True G121399
TU137870 lncRNA downstream 275132 656400 ~ 656610 (-) True G121398
TU139514 lncRNA upstream 444597 1381428 ~ 1385325 (-) True G122859
TU139518 lncRNA upstream 507755 1444586 ~ 1452856 (-) False G122860
TU139516 lncRNA upstream 514693 1451524 ~ 1452856 (-) True G122860
TU139582 lncRNA upstream 555020 1491851 ~ 1492211 (-) True G122923
TU139585 lncRNA upstream 564744 1501575 ~ 1505218 (-) True G122926
CI01000024_00913269_00915063.mRNA mRNA downstream 16177 912852 ~ 915565 (-) True CI01000024_00913269_00915063
CI01000024_00871953_00893156.mRNA mRNA downstream 38586 871689 ~ 893156 (-) True CI01000024_00871953_00893156
CI01000024_00825386_00837898.mRNA mRNA downstream 93192 824968 ~ 838550 (-) False CI01000024_00825386_00837898
CI01000024_00766380_00783144.mRNA mRNA downstream 147486 765081 ~ 784256 (-) True CI01000024_00766380_00783144
CI01000024_00758857_00762162.mRNA mRNA downstream 167963 758598 ~ 763779 (-) True CI01000024_00758857_00762162
CI01000024_00955186_00965837.mRNA mRNA upstream 17886 954717 ~ 966070 (-) True CI01000024_00955186_00965837
CI01000024_01258292_01261764.mRNA mRNA upstream 320448 1257279 ~ 1262033 (-) True CI01000024_01258292_01261764
CI01000024_01405425_01412752.mRNA mRNA upstream 468244 1405075 ~ 1412752 (-) True CI01000024_01405425_01412752
CI01000024_01423879_01438170.mRNA mRNA upstream 486860 1423691 ~ 1438170 (-) True CI01000024_01423879_01438170
CI01000024_01455583_01465466.mRNA mRNA upstream 518564 1455395 ~ 1465577 (-) True CI01000024_01455583_01465466
TU137850 other downstream 104891 823733 ~ 826851 (-) True G121380
TU139935 other upstream 1610629 2547460 ~ 2555036 (-) True G123233
TU140468 other upstream 2999211 3936042 ~ 3937057 (-) True G123701
TU142441 other upstream 6420406 7357237 ~ 7357595 (-) False G125457
TU142437 other upstream 6420874 7357705 ~ 7358104 (-) False G125457
TU142439 other upstream 6420923 7357754 ~ 7358104 (-) True G125457

Expression Profile