RNA id: TU137870



Basic Information


Item Value
RNA id TU137870
length 211
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G121398
representative True

Chromosome Information


Item Value
chromosome id CI01000024
NCBI id null
chromosome length 8644187
location 656400 ~ 656610 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TGATTGACGTGCAAAAACCGTCTGATATGTCACCTGAATGCATACACACAGTTAAACGTGCTGAGAAGATGCTACTGTTTTATGCGATCACAGATATCTCGTGCATCACAGCGCACACAAGCTTTGAGGCAGTCTGTCTTAATTGAGATGTGTTATAGGCTGCCCTCGTCAGTCTTATTTGTCAATCATTTGGTTAAAGCATACACTTATA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU137869 lncRNA downstream 900 655266 ~ 655500 (-) True G121397
TU137839 lncRNA downstream 11707 625239 ~ 644693 (-) True G121376
TU137866 lncRNA downstream 17972 638002 ~ 638428 (-) True G121394
TU137836 lncRNA downstream 21807 623313 ~ 634593 (-) True G121373
TU137827 lncRNA downstream 49583 606330 ~ 606817 (-) True G121365
TU137871 lncRNA upstream 821 657431 ~ 657747 (-) True G121399
TU137884 lncRNA upstream 182085 838695 ~ 842019 (-) True G121412
TU137888 lncRNA upstream 189384 845994 ~ 848462 (-) True G121415
TU137896 lncRNA upstream 217817 874427 ~ 905944 (-) True G121423
TU139514 lncRNA upstream 724818 1381428 ~ 1385325 (-) True G122859
CI01000024_00479343_00529567.mRNA mRNA downstream 126833 479296 ~ 529567 (-) True CI01000024_00479343_00529567
CI01000024_00452459_00455193.mRNA mRNA downstream 200381 452208 ~ 456019 (-) True CI01000024_00452459_00455193
CI01000024_00227784_00237812.mRNA mRNA downstream 418019 226961 ~ 238381 (-) True CI01000024_00227784_00237812
CI01000024_00171018_00176868.mRNA mRNA downstream 479532 170990 ~ 176868 (-) True CI01000024_00171018_00176868
CI01000024_00029438_00038223.mRNA mRNA downstream 616426 28975 ~ 39974 (-) True CI01000024_00029438_00038223
CI01000024_00697714_00714666.mRNA mRNA upstream 40766 697376 ~ 715313 (-) True CI01000024_00697714_00714666
CI01000024_00747057_00748859.mRNA mRNA upstream 90121 746731 ~ 748859 (-) True CI01000024_00747057_00748859
CI01000024_00758857_00762162.mRNA mRNA upstream 101988 758598 ~ 763779 (-) True CI01000024_00758857_00762162
CI01000024_00766380_00783144.mRNA mRNA upstream 108471 765081 ~ 784256 (-) True CI01000024_00766380_00783144
CI01000024_00825386_00837898.mRNA mRNA upstream 168358 824968 ~ 838550 (-) False CI01000024_00825386_00837898
TU137850 other upstream 167123 823733 ~ 826851 (-) True G121380
TU139935 other upstream 1890850 2547460 ~ 2555036 (-) True G123233
TU140468 other upstream 3279432 3936042 ~ 3937057 (-) True G123701
TU142441 other upstream 6700627 7357237 ~ 7357595 (-) False G125457
TU142437 other upstream 6701095 7357705 ~ 7358104 (-) False G125457

Expression Profile